RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 GTSCR1Q86UQ5 136 aa13.48□□□□□ -0.25
HDLBP-208ENST00000422080 TMEM17Q86X19 198 aa13.48□□□□□ -0.25
HDLBP-208ENST00000422080 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
HDLBP-208ENST00000422080 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
HDLBP-208ENST00000422080 CMTM3Q96MX0 182 aa13.48□□□□□ -0.25
HDLBP-208ENST00000422080 SRSF8Q9BRL6 282 aaKnown RBP13.48□□□□□ -0.25
HDLBP-208ENST00000422080 CGB1A6NKQ9 187 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 PPP5D1E7EU14 171 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 LGALS9O00182 355 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 DEFA4P12838 97 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 MYOD1P15172 320 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 ADAMTSL5Q6ZMM2 481 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 OR5H2Q8NGV7 314 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 OR51H1Q8NH63 302 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 ZNF2Q9BSG1 426 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-208ENST00000422080 COMMD9Q9P000 198 aa13.47□□□□□ -0.25
HDLBP-208ENST00000422080 IGLV11-55A0A075B6I3 123 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 IZUMO1RA6ND01 250 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 PGLYRP1O75594 196 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-208ENST00000422080 OR2C1O95371 312 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 PMP2P02689 132 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 CADM3Q8N126 398 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 DMBX1Q8NFW5 382 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 EEF1AKMT3Q96AZ1 226 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 TMEM140Q9NV12 185 aa13.46□□□□□ -0.25
HDLBP-208ENST00000422080 DNAH7Q8WXX0 4024 aa13.46□□□□□ -0.26
HDLBP-208ENST00000422080 TRAV3A0A0B4J244 114 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 SMIM31A0A1B0GVY4 71 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 S1PR2O95136 353 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 APOA1P02647 267 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 F2RP25116 425 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 DEFB114Q30KQ6 69 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 CD300EQ496F6 205 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-208ENST00000422080 THOC7Q6I9Y2 204 aaKnown RBP13.45□□□□□ -0.26
HDLBP-208ENST00000422080 CLEC19AQ6UXS0 136 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 LYSMD2Q8IV50 215 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 LAX1Q8IWV1 398 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 CMTM1Q8IZ96 169 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 OR6F1Q8NGZ6 308 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 MUC7Q8TAX7 377 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 GPX8Q8TED1 209 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 CXorf58Q96LI9 332 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 CCDC140Q96MF4 163 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 FUNDC2Q9BWH2 189 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 TUBA4BQ9H853 241 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 TECRQ9NZ01 308 aaKnown RBP13.45□□□□□ -0.26
HDLBP-208ENST00000422080 COMMD3Q9UBI1 195 aa13.45□□□□□ -0.26
HDLBP-208ENST00000422080 TRBV7-1A0A0A6YYK4 115 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 IGLC7A0M8Q6 106 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 C2orf70A6NJV1 201 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 IGHV3-23P01764 117 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 HLA-AP01891 365 aaKnown RBP13.44□□□□□ -0.26
HDLBP-208ENST00000422080 REG1AP05451 166 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 EIF4EP06730 217 aaKnown RBP13.44□□□□□ -0.26
HDLBP-208ENST00000422080 FOLR2P14207 255 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 ARL3P36405 182 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 ERVK-16P61578 105 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 NCS1P62166 190 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 FAM106AQ4KMX7 169 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 DYNLRB2Q8TF09 96 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 DGCR14Q96DF8 476 aaKnown RBP13.44□□□□□ -0.26
HDLBP-208ENST00000422080 QTRT1Q9BXR0 403 aaKnown RBP13.44□□□□□ -0.26
HDLBP-208ENST00000422080 SCPEP1Q9HB40 452 aa13.44□□□□□ -0.26
HDLBP-208ENST00000422080 ZNF785A8K8V0 405 aa13.43□□□□□ -0.26
HDLBP-208ENST00000422080 GPR31O00270 319 aa13.43□□□□□ -0.26
HDLBP-208ENST00000422080 HSD17B13Q7Z5P4 300 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-208ENST00000422080 CITED4Q96RK1 184 aa13.43□□□□□ -0.26
HDLBP-208ENST00000422080 THYN1Q9P016 225 aa13.43□□□□□ -0.26
HDLBP-208ENST00000422080 S4R3C0 116 aa13.43□□□□□ -0.26
HDLBP-208ENST00000422080 TEX50A0A1B0GTY4 177 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 MARCH11A6NNE9 402 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 CYB5BO43169 146 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 RLN1P04808 185 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 CLEC3BP05452 202 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 TRAPPC2P0DI81 140 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 TRAPPC2BP0DI82 140 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 HLA-DMAP28067 261 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 HRH1P35367 487 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 LPAR6P43657 344 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 VBP1P61758 197 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 HAGHQ16775 308 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 OR1L8Q8NGR8 309 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 FCAMRQ8WWV6 532 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 SPATA25Q9BR10 227 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 FXYD6Q9H0Q3 95 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 ZC4H2Q9NQZ6 224 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 SLC2A8Q9NY64 477 aa13.42□□□□□ -0.26
HDLBP-208ENST00000422080 MFSD2BA6NFX1 497 aa13.41□□□□□ -0.26
HDLBP-208ENST00000422080 RPA2P15927 270 aa13.41□□□□□ -0.26
HDLBP-208ENST00000422080 CBLN1P23435 193 aa13.41□□□□□ -0.26
HDLBP-208ENST00000422080 PTBP1P26599 531 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDLBP-208ENST00000422080 RORCP51449 518 aa13.41□□□□□ -0.26
HDLBP-208ENST00000422080 ZNF585BQ52M93 769 aa13.41□□□□□ -0.26
HDLBP-208ENST00000422080 LPCAT3Q6P1A2 487 aa13.41□□□□□ -0.26
HDLBP-208ENST00000422080 ZNF502Q8TBZ5 544 aa13.41□□□□□ -0.26
HDLBP-208ENST00000422080 NEURL2Q9BR09 285 aa13.41□□□□□ -0.26
HDLBP-208ENST00000422080 FAM212BQ9NTI7 297 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-208ENST00000422080 RYR3Q15413 4870 aa13.4□□□□□ -0.26
HDLBP-208ENST00000422080 ZNF320A2RRD8 509 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 1684.5 ms