RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 FAM219AQ8IW50 185 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.41□□□□□ -0.42
DDX55-203ENST00000421670 OR4A16Q8NH70 328 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 GRPEL2Q8TAA5 225 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 ABHD5Q8WTS1 349 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 LINC00527Q9UJ94 153 aa12.41□□□□□ -0.42
DDX55-203ENST00000421670 ATP6V0E1O15342 81 aa12.4□□□□□ -0.42
DDX55-203ENST00000421670 COMPP49747 757 aaPredicted RBP12.4□□□□□ -0.42
DDX55-203ENST00000421670 FXYD3Q14802 87 aa12.4□□□□□ -0.42
DDX55-203ENST00000421670 C2orf68Q2NKX9 166 aa12.4□□□□□ -0.42
DDX55-203ENST00000421670 ARPC1AQ92747 370 aa12.4□□□□□ -0.42
DDX55-203ENST00000421670 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
DDX55-203ENST00000421670 OR51J1Q9H342 316 aa12.4□□□□□ -0.42
DDX55-203ENST00000421670 TMED3Q9Y3Q3 217 aa12.4□□□□□ -0.42
DDX55-203ENST00000421670 PIGBOS1A0A0B4J2F0 54 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 E7EUB6 86 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 SSNA1O43805 119 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 TSPAN9O75954 239 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 NXPH3O95157 252 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 APELAP0DMC3 54 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 CADM3Q8N126 398 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 Q8N2B8 174 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 OR2T6Q8NHC8 308 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 SRSF12Q8WXF0 261 aaKnown RBP12.39□□□□□ -0.43
DDX55-203ENST00000421670 NOL4LQ96MY1 436 aaPredicted RBP12.39□□□□□ -0.43
DDX55-203ENST00000421670 TMEM14BQ9NUH8 114 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 OR51B2Q9Y5P1 312 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 A0A1B0GW64 132 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 KCNAB3O43448 404 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 SULT1A3P0DMM9 295 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 SULT1A4P0DMN0 295 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 VDAC2P45880 294 aaPredicted RBP12.39□□□□□ -0.43
DDX55-203ENST00000421670 KRTAP24-1Q3LI83 254 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 FOXRED2Q8IWF2 684 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 COMMD5Q9GZQ3 224 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 PRNDQ9UKY0 176 aa12.39□□□□□ -0.43
DDX55-203ENST00000421670 FOXA2Q9Y261 457 aaPredicted RBP12.39□□□□□ -0.43
DDX55-203ENST00000421670 CGB1A6NKQ9 187 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 FAM25EA8MYX2 175 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 GOSR2O14653 212 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 ST8SIA3O43173 380 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 NDUFA7O95182 113 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 IFNA21P01568 189 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
DDX55-203ENST00000421670 MAS1LP35410 378 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 RPL27AP46776 148 aaKnown RBP12.38□□□□□ -0.43
DDX55-203ENST00000421670 SMCO1Q147U7 214 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 SPINK9Q5DT21 86 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 LINC01006Q8NI28 216 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 OR10C1Q96KK4 312 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
DDX55-203ENST00000421670 HINT2Q9BX68 163 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 SERTAD4Q9NUC0 356 aa12.38□□□□□ -0.43
DDX55-203ENST00000421670 COL6A5A8TX70 2615 aa12.37□□□□□ -0.43
DDX55-203ENST00000421670 TEX50A0A1B0GTY4 177 aa12.37□□□□□ -0.43
DDX55-203ENST00000421670 FGF2P09038 288 aa12.37□□□□□ -0.43
DDX55-203ENST00000421670 HKR1P10072 659 aa12.37□□□□□ -0.43
DDX55-203ENST00000421670 MDKP21741 143 aaPredicted RBP12.37□□□□□ -0.43
DDX55-203ENST00000421670 THOC7Q6I9Y2 204 aaKnown RBP12.37□□□□□ -0.43
DDX55-203ENST00000421670 ZNF429Q86V71 674 aa12.37□□□□□ -0.43
DDX55-203ENST00000421670 LFNGQ8NES3 379 aa12.37□□□□□ -0.43
DDX55-203ENST00000421670 OR1S1Q8NH92 325 aa12.37□□□□□ -0.43
DDX55-203ENST00000421670 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.37□□□□□ -0.43
DDX55-203ENST00000421670 WSB1Q9Y6I7 421 aa12.37□□□□□ -0.43
DDX55-203ENST00000421670 A0A1B0GU03 582 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 C13orf42A0A1B0GVH6 325 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 HMX3A6NHT5 357 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 MSGN1A6NI15 193 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 TEX22C9J3V5 150 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 G3V318 75 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 AP4M1O00189 453 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 SIX6O95475 246 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 IAH1Q2TAA2 248 aaPredicted RBP12.36□□□□□ -0.43
DDX55-203ENST00000421670 OR10W1Q8NGF6 305 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 OR4F5Q8NH21 305 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 SGMS2Q8NHU3 365 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 C16orf95Q9H693 158 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 COA4Q9NYJ1 87 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 FKBP11Q9NYL4 201 aa12.36□□□□□ -0.43
DDX55-203ENST00000421670 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 IFNA17P01571 189 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 IGF1P05019 195 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 SLC25A6P12236 298 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 ASPHD1Q5U4P2 390 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 STPG2Q8N412 459 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 OR1L8Q8NGR8 309 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 OR5B3Q8NH48 314 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 SPIN2AQ99865 258 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 SPIN2BQ9BPZ2 258 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 PDCD10Q9BUL8 212 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 NDUFA4L2Q9NRX3 87 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 ZNF257Q9Y2Q1 563 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 TRAV41A0A0B4J266 112 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 PITX3O75364 302 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 AREGP15514 252 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 HSPE1P61604 102 aaKnown RBP12.35□□□□□ -0.43
DDX55-203ENST00000421670 AARDQ4LEZ3 155 aa12.35□□□□□ -0.43
DDX55-203ENST00000421670 OR5M8Q8NGP6 311 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms