RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CX3CL1P78423 397 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 SSBP2P81877 361 aaPredicted RBP9.89□□□□□ -0.83
TMEM53-206ENST00000420706 IL15RAQ13261 267 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 TNXAQ16473 311 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 IAH1Q2TAA2 248 aaPredicted RBP9.89□□□□□ -0.83
TMEM53-206ENST00000420706 AARDQ4LEZ3 155 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 THOC7Q6I9Y2 204 aaKnown RBP9.89□□□□□ -0.83
TMEM53-206ENST00000420706 Q6ZS46 218 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 ZNF429Q86V71 674 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 ZBTB8BQ8NAP8 495 aaPredicted RBP9.89□□□□□ -0.83
TMEM53-206ENST00000420706 OR4D5Q8NGN0 318 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 OR1S1Q8NH92 325 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 HSPB9Q9BQS6 159 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 TMEM14BQ9NUH8 114 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 FKBP11Q9NYL4 201 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 FOXA2Q9Y261 457 aaPredicted RBP9.89□□□□□ -0.83
TMEM53-206ENST00000420706 OR51B2Q9Y5P1 312 aa9.89□□□□□ -0.83
TMEM53-206ENST00000420706 FAM181BA6NEQ2 426 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 LINC01548A6NM66 108 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 ST8SIA3O43173 380 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 OPN1MWP04001 364 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 OPN1MW2P0DN77 364 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 OPN1MW3P0DN78 364 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 H2BFSP57053 126 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 HSPE1P61604 102 aaKnown RBP9.88□□□□□ -0.83
TMEM53-206ENST00000420706 GNB1P62873 340 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 SRSF4Q08170 494 aaKnown RBP9.88□□□□□ -0.83
TMEM53-206ENST00000420706 FXYD3Q14802 87 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 C9orf152Q5JTZ5 239 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 OR52E5Q8NH55 327 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 CHAC2Q8WUX2 184 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 WDR89Q96FK6 387 aaPredicted RBP9.88□□□□□ -0.83
TMEM53-206ENST00000420706 COMMD5Q9GZQ3 224 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 GSKIPQ9P0R6 139 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 ZNF257Q9Y2Q1 563 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 TET2Q6N021 2002 aaPredicted RBP9.88□□□□□ -0.83
TMEM53-206ENST00000420706 PLXNB1O43157 2135 aa9.88□□□□□ -0.83
TMEM53-206ENST00000420706 TNCP24821 2201 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 TRIM77I1YAP6 450 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 ACTL6BO94805 426 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 CNIH1O95406 144 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 IGHG2P01859 326 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 RPL27AP46776 148 aaKnown RBP9.87□□□□□ -0.83
TMEM53-206ENST00000420706 COMPP49747 757 aaPredicted RBP9.87□□□□□ -0.83
TMEM53-206ENST00000420706 BCAP31P51572 246 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 CYCSP99999 105 aaKnown RBP9.87□□□□□ -0.83
TMEM53-206ENST00000420706 NDPQ00604 133 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 ID3Q02535 119 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 CXorf66Q5JRM2 361 aaPredicted RBP9.87□□□□□ -0.83
TMEM53-206ENST00000420706 C10orf55Q5SWW7 151 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 OR1L8Q8NGR8 309 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 OR5B3Q8NH48 314 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 SRSF12Q8WXF0 261 aaKnown RBP9.87□□□□□ -0.83
TMEM53-206ENST00000420706 PDCD10Q9BUL8 212 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 NMES1Q9C002 83 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 PRSS22Q9GZN4 317 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 NPFFR1Q9GZQ6 430 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 NDUFA4L2Q9NRX3 87 aa9.87□□□□□ -0.83
TMEM53-206ENST00000420706 A0A1B0GW64 132 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 FAM90A26D6RGX4 464 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 NXPH3O95157 252 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 IFNA17P01571 189 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 TRAPPC2P0DI81 140 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 TRAPPC2BP0DI82 140 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 EGR2P11161 476 aaPredicted RBP9.86□□□□□ -0.83
TMEM53-206ENST00000420706 NKX2-1P43699 371 aaPredicted RBP9.86□□□□□ -0.83
TMEM53-206ENST00000420706 SPCS3P61009 180 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 RPL15P61313 204 aaKnown RBP9.86□□□□□ -0.83
TMEM53-206ENST00000420706 PDLIM3Q53GG5 364 aaPredicted RBP9.86□□□□□ -0.83
TMEM53-206ENST00000420706 FYTTD1Q96QD9 318 aaKnown RBP9.86□□□□□ -0.83
TMEM53-206ENST00000420706 ZNF436Q9C0F3 470 aaPredicted RBP9.86□□□□□ -0.83
TMEM53-206ENST00000420706 ZNF702PQ9H963 129 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 HSPB7Q9UBY9 170 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 FBXO7Q9Y3I1 522 aa9.86□□□□□ -0.83
TMEM53-206ENST00000420706 MSGN1A6NI15 193 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 TEX22C9J3V5 150 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 KCNAB3O43448 404 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 TSPAN9O75954 239 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 MBPP02686 304 aaPredicted RBP9.85□□□□□ -0.83
TMEM53-206ENST00000420706 CRYBA1P05813 215 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 PRCDQ00LT1 54 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 TNFRSF9Q07011 255 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 SPINK9Q5DT21 86 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 Q6ZSV7 163 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 SLC35E3Q7Z769 313 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 Q8N2B8 174 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 ARPC1AQ92747 370 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 FAM103A1Q9BTL3 118 aaKnown RBP9.85□□□□□ -0.83
TMEM53-206ENST00000420706 HINT2Q9BX68 163 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 RBKSQ9H477 322 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 CACFD1Q9UGQ2 172 aa9.85□□□□□ -0.83
TMEM53-206ENST00000420706 ATP6V0E1O15342 81 aa9.84□□□□□ -0.83
TMEM53-206ENST00000420706 MED6O75586 246 aa9.84□□□□□ -0.83
TMEM53-206ENST00000420706 SCGB1D2O95969 90 aa9.84□□□□□ -0.83
TMEM53-206ENST00000420706 GIPP09681 153 aaPredicted RBP9.84□□□□□ -0.83
TMEM53-206ENST00000420706 POLR2GP62487 172 aaKnown RBP eCLIP9.84□□□□□ -0.83
TMEM53-206ENST00000420706 SRSF2Q01130 221 aaKnown RBP9.84□□□□□ -0.83
TMEM53-206ENST00000420706 RAB32Q13637 225 aa9.84□□□□□ -0.83
TMEM53-206ENST00000420706 OR10W1Q8NGF6 305 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms