RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RRASP10301 218 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 AADACP22760 399 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 FCGR2CP31995 323 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 CBX5P45973 191 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 LGALS7P47929 136 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 RAB9AP51151 201 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 UBE2KP61086 200 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 GNB1P62873 340 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 RPL30P62888 115 aaKnown RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 TMEM267Q0VDI3 215 aaPredicted RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 EIF4EBP1Q13541 118 aaPredicted RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 KIAA0141Q14154 515 aaPredicted RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 FXYD3Q14802 87 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 UNQ5815/PRO19632Q6UWF5 114 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 KCTD9Q7L273 389 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 ANKRD13BQ86YJ7 626 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 TCTEX1D1Q8N7M0 179 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 ZNF491Q8N8L2 437 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 LFNGQ8NES3 379 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 GRPEL2Q8TAA5 225 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 CASTOR1Q8WTX7 329 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 UBE2E2Q96LR5 201 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 MRPS26Q9BYN8 205 aaKnown RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 GNB4Q9HAV0 340 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 IFT46Q9NQC8 304 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 COMMD3Q9UBI1 195 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 ANAPC10Q9UM13 185 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 RBMX2Q9Y388 322 aaKnown RBP5.36□□□□□ -1.55
HMGN1-205ENST00000419378 NUBP2Q9Y5Y2 271 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 DNAH9Q9NYC9 4486 aa5.36□□□□□ -1.55
HMGN1-205ENST00000419378 I3L521 148 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 CNIH1O95406 144 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 APOA1P02647 267 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 ALDH3B2P48448 385 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 RAB25P57735 213 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 FXYD4P59646 89 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 RUNX1Q01196 453 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 PJVKQ0ZLH3 352 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 CDK10Q15131 360 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 MRGPRG-AS1Q2M3A8 158 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 VMA21Q3ZAQ7 101 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 AKIRIN2Q53H80 203 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 ACTBL2Q562R1 376 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 OR2B11Q5JQS5 317 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 ASPHD1Q5U4P2 390 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 GPR107Q5VW38 600 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 PYHIN1Q6K0P9 492 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 GPR141Q7Z602 305 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 OR5AP2Q8NGF4 316 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 OR5M8Q8NGP6 311 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 SECTM1Q8WVN6 248 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 TCTEX1D2Q8WW35 142 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 ACOT12Q8WYK0 555 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 CMTM3Q96MX0 182 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 OR5B12Q96R08 314 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 HSD17B10Q99714 261 aaKnown RBP5.35□□□□□ -1.55
HMGN1-205ENST00000419378 CCL28Q9NRJ3 127 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 TAS2R8Q9NYW2 309 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 C11orf21Q9P2W6 132 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 VSIG4Q9Y279 399 aa5.35□□□□□ -1.55
HMGN1-205ENST00000419378 MRPS7Q9Y2R9 242 aaKnown RBP5.35□□□□□ -1.55
HMGN1-205ENST00000419378 TNCP24821 2201 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 TNFSF12O43508 249 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 HPGDSO60760 199 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 PMP2P02689 132 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 LGALS1P09382 135 aaKnown RBP5.34□□□□□ -1.55
HMGN1-205ENST00000419378 SAA1P0DJI8 122 aaPredicted RBP5.34□□□□□ -1.55
HMGN1-205ENST00000419378 ELK1P19419 428 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 HOXD3P31249 432 aaPredicted RBP5.34□□□□□ -1.55
HMGN1-205ENST00000419378 PRSS3P35030 304 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 RORCP51449 518 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 TAS2R46P59540 309 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 KRTAP10-11P60412 298 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 EGFEM1PQ0D2K5 195 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 MSMO1Q15800 293 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 PRSS8Q16651 343 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 IDO2Q6ZQW0 420 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 TMEM17Q86X19 198 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 VKORC1L1Q8N0U8 176 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 TEX45Q8NA69 505 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 POC5Q8NA72 575 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 OR11H1Q8NG94 326 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 OR1N2Q8NGR9 330 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 OR4S2Q8NH73 311 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 AP3S1Q92572 193 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 MS4A10Q96PG2 267 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 MCRIP2Q9BUT9 160 aaKnown RBP5.34□□□□□ -1.55
HMGN1-205ENST00000419378 GPR61Q9BZJ8 451 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 ALX4Q9H161 411 aaPredicted RBP5.34□□□□□ -1.55
HMGN1-205ENST00000419378 SLA2Q9H6Q3 261 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 EHFQ9NZC4 300 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 PRELID3BQ9Y3B1 194 aa5.34□□□□□ -1.55
HMGN1-205ENST00000419378 IGHV4OR15-8A0A075B7B6 117 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 A0A087WW49 117 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 SMIM31A0A1B0GVY4 71 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 CGB1A6NKQ9 187 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 H3BUA1 57 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 CREBL2O60519 120 aaPredicted RBP5.33□□□□□ -1.56
HMGN1-205ENST00000419378 IGHV3-11P01762 117 aa5.33□□□□□ -1.56
HMGN1-205ENST00000419378 TRGV3P03979 118 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms