RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 A0A1W2PN81 502 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 hCG_1809904A0A1W2PP81 198 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 A0A1W2PPE2 198 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 A0A1W2PR64 198 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 A0A1W2PRV1 198 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 H0YJW9 148 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 J3QR06 171 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TGOLN2O43493 480 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TSPAN9O75954 239 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CHRNA7P36544 502 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 FAM90A2PQ658T7 463 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 C1QL4Q86Z23 238 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 OR1L8Q8NGR8 309 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 LEAP2Q969E1 77 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 HIST1H2BAQ96A08 127 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TMEM204Q9BSN7 226 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 C19orf24Q9BVV8 132 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 DCAF16Q9NXF7 216 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 ANKHD1Q8IWZ3 2542 aaKnown RBP11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TET2Q6N021 2002 aaPredicted RBP11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 PIEZO2Q9H5I5 2752 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 YLPM1P49750 1951 aaKnown RBP11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 C1orf196B1AJZ1 125 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 PDE6DO43924 150 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 DLX6P56179 175 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TFF3Q07654 80 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 BSXQ3C1V8 233 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 C2orf83Q53S99 150 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CYP2G1PQ6ZSU1 146 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 VKORC1L1Q8N0U8 176 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 H1FXQ92522 213 aaKnown RBP11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RAB24Q969Q5 203 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 FLYWCH2Q96CP2 140 aaKnown RBP11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RALYQ9UKM9 306 aaKnown RBP11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 WASHC3Q9Y3C0 194 aa11.89□□□□□ -0.51
HLA-DPA1-242ENST00000419277 A0A1W2PPV4 95 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 MMP23AO75900 390 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 OR2C1O95371 312 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 MT-CO2P00403 227 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 IGKV1D-33P01593 117 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 IGKV1-33P01594 117 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CRYBA1P05813 215 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RPL29P47914 159 aaKnown RBP11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 LGALS7P47929 136 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SSX2Q16385 188 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 Q8N7P7 452 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CACNG8Q8WXS5 425 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SLC25A22Q9H936 323 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 NAT8Q9UHE5 227 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SPTA1P02549 2419 aa11.88□□□□□ -0.51
HLA-DPA1-242ENST00000419277 ATMQ13315 3056 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 A0A1W2PPE3 182 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RRHO14718 337 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 VENTXO95231 258 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 IGHV3-7P01780 117 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SAA1P0DJI8 122 aaPredicted RBP11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 IGHV1-8P0DP01 117 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RPL8P62917 257 aaKnown RBP11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 C8orf46Q8TAG6 207 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 NEUROG1Q92886 237 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 ST6GALNAC6Q969X2 333 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 GGTLC1Q9BX51 225 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 COMMD5Q9GZQ3 224 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RAB1BQ9H0U4 201 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CTSZQ9UBR2 303 aa11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 AMMECR1Q9Y4X0 333 aaPredicted RBP11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 KLF2Q9Y5W3 355 aaPredicted RBP11.87□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 FAM90A27PA6NNH2 459 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RAB5AP20339 215 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 ERHP84090 104 aaKnown RBP11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 HNF4GQ14541 408 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 VMA21Q3ZAQ7 101 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SPINK9Q5DT21 86 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TGIF2LXQ8IUE1 241 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 ZCCHC24Q8N2G6 241 aaKnown RBP11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 BEND2Q8NDZ0 799 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SLC35E1Q96K37 410 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 MRPL20Q9BYC9 149 aaKnown RBP11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TMEM133Q9H2Q1 129 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 PXMP4Q9Y6I8 212 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 DMXL2Q8TDJ6 3036 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 F6UZH7 168 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CXorf1O96002 111 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 IGKV1-16P04430 117 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 CCL3L1P16619 93 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 SUB1P53999 127 aaKnown RBP eCLIP11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 PRRX1P54821 245 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 RHOBP62745 196 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 HLA-DRB5Q30154 266 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 AKIRIN2Q53H80 203 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 PNKDQ8N490 385 aa11.86□□□□□ -0.51
HLA-DPA1-242ENST00000419277 TIMD4Q96H15 378 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms