RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 OR5T1Q8NG75 326 aa13.86□□□□□ -0.19
VCP-202ENST00000417448 RHOVQ96L33 236 aa13.86□□□□□ -0.19
VCP-202ENST00000417448 A0A1W2PN81 502 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 MSGN1A6NI15 193 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 MPPED1O15442 326 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 OR2A4O95047 310 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 F2RP25116 425 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 PTBP1P26599 531 aaKnown RBP eCLIP13.85□□□□□ -0.19
VCP-202ENST00000417448 CHRNA7P36544 502 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 SP6Q3SY56 376 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 C19orf54Q5BKX5 351 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 ZNF57Q68EA5 555 aaPredicted RBP13.85□□□□□ -0.19
VCP-202ENST00000417448 OR4A47Q6IF82 309 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 TEX38Q6PEX7 206 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 TOMM5Q8N4H5 51 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 POC5Q8NA72 575 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 BORCS5Q969J3 196 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 MS4A10Q96PG2 267 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 OR2A7Q96R45 310 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 TM2D3Q9BRN9 247 aa13.85□□□□□ -0.19
VCP-202ENST00000417448 RTBDNQ9BSG5 229 aaPredicted RBP13.85□□□□□ -0.19
VCP-202ENST00000417448 E7EUB6 86 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 KBTBD11O94819 623 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 HPRT1P00492 218 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 HRASP01112 189 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 KRASP01116 189 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 IGKV1-39P01597 117 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 IGKV1D-39P04432 117 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 G6PCP35575 357 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 DEFA5Q01523 94 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 FHL3Q13643 280 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 ASPHD1Q5U4P2 390 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 TP53RKQ96S44 253 aa13.84□□□□□ -0.19
VCP-202ENST00000417448 HMX3A6NHT5 357 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 RBFOX2O43251 390 aaKnown RBP eCLIP13.83□□□□□ -0.2
VCP-202ENST00000417448 IGHG4P01861 327 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 NQO2P16083 231 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 C19orf35Q6ZS72 473 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 MINDY2Q8NBR6 621 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 ADAD2Q8NCV1 583 aaKnown RBP13.83□□□□□ -0.2
VCP-202ENST00000417448 DMBX1Q8NFW5 382 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 TMEM167AQ8TBQ9 72 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 ZFAND1Q8TCF1 268 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 OR5B12Q96R08 314 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 PHB2Q99623 299 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 VSIG4Q9Y279 399 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 NSG2Q9Y328 171 aa13.83□□□□□ -0.2
VCP-202ENST00000417448 A0A1B0GW64 132 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 JTBO76095 146 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 CTSDP07339 412 aaPredicted RBP13.82□□□□□ -0.2
VCP-202ENST00000417448 S100GP29377 79 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 CDX1P47902 265 aaPredicted RBP13.82□□□□□ -0.2
VCP-202ENST00000417448 TAS2R31P59538 309 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 FOXE3Q13461 319 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 IZUMO4Q1ZYL8 232 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 CXorf66Q5JRM2 361 aaPredicted RBP13.82□□□□□ -0.2
VCP-202ENST00000417448 MMD2Q8IY49 270 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 SRSF12Q8WXF0 261 aaKnown RBP13.82□□□□□ -0.2
VCP-202ENST00000417448 FYTTD1Q96QD9 318 aaKnown RBP13.82□□□□□ -0.2
VCP-202ENST00000417448 PRRT1Q99946 306 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 GON7Q9BXV9 100 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 PLEKHA2Q9HB19 425 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 TMEM140Q9NV12 185 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 PRR13Q9NZ81 148 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 COPZ2Q9P299 210 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 GPR132Q9UNW8 380 aa13.82□□□□□ -0.2
VCP-202ENST00000417448 FOXA2Q9Y261 457 aaPredicted RBP13.82□□□□□ -0.2
VCP-202ENST00000417448 UPK2O00526 184 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 IGLV1-40P01703 118 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 IL6RP08887 468 aaPredicted RBP13.81□□□□□ -0.2
VCP-202ENST00000417448 OR9G9P0C7N8 305 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 PSMB8P28062 276 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 CRIP2P52943 208 aaPredicted RBP13.81□□□□□ -0.2
VCP-202ENST00000417448 RND3P61587 244 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 TMEM267Q0VDI3 215 aaPredicted RBP13.81□□□□□ -0.2
VCP-202ENST00000417448 KIAA0141Q14154 515 aaPredicted RBP13.81□□□□□ -0.2
VCP-202ENST00000417448 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 RNF152Q8N8N0 203 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 GDPD1Q8N9F7 314 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 CD300LFQ8TDQ1 290 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 ZNF486Q96H40 463 aaPredicted RBP13.81□□□□□ -0.2
VCP-202ENST00000417448 AKIP1Q9NQ31 210 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 ZNF355PQ9NSJ1 428 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 SCP2D1Q9UJQ7 156 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 ZNF580Q9UK33 172 aa13.81□□□□□ -0.2
VCP-202ENST00000417448 C14orf166Q9Y224 244 aaKnown RBP13.81□□□□□ -0.2
VCP-202ENST00000417448 C3orf85A0A1B0GTC6 90 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 MARCH11A6NNE9 402 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 ACTL6BO94805 426 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 PRH1P02810 166 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 ELANEP08246 267 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 INPP1P49441 399 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 RAB9AP51151 201 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 CCR6P51684 374 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 AKIRIN2Q53H80 203 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 TMEM65Q6PI78 240 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 TMEM230Q96A57 120 aa13.8□□□□□ -0.2
VCP-202ENST00000417448 ALX4Q9H161 411 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms