RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SOX14O95416 240 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 RPS4Y1P22090 263 aaKnown RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 CRYGSP22914 178 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 PAX6P26367 422 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 HOXC5Q00444 222 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 OR2F1Q13607 317 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 PTGES3Q15185 160 aaKnown RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 TMEM241Q24JQ0 296 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 CEACAM21Q3KPI0 293 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 C6orf99Q4VX62 202 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 CD200R1LQ6Q8B3 271 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 GSG1LQ6UXU4 331 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 ZNF664Q8N3J9 261 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 GNPDA2Q8TDQ7 276 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 RXFP4Q8TDU9 374 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 TSLPQ969D9 159 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 IMMP1LQ96LU5 166 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 WFDC6Q9BQY6 131 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 MARVELD1Q9BSK0 173 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 FGF23Q9GZV9 251 aaPredicted RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 DEFB127Q9H1M4 99 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 C12orf4Q9NQ89 552 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 TAS2R5Q9NYW4 299 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 RPS6KB2Q9UBS0 482 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 ANXA10Q9UJ72 324 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 ALMS1Q8TCU4 4167 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 MYO7BQ6PIF6 2116 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 HEATR5AQ86XA9 2040 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 NKX2-6A6NCS4 301 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 C8orf87E5RJ46 101 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 MRPS14O60783 128 aaKnown RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 SLC25A16P16260 332 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 RAB3BP20337 219 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 RPL23P62829 140 aaKnown RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 MAPK14Q16539 360 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 NXNL2Q5VZ03 156 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 TMEM236Q5W0B7 351 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 ZNF550Q7Z398 422 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 MYPOPQ86VE0 399 aaPredicted RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 CLVS1Q8IUQ0 354 aaPredicted RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 STX19Q8N4C7 294 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 TEX29Q8N6K0 151 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 ZNF615Q8N8J6 731 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 OR4X1Q8NH49 305 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 DYNC2LI1Q8TCX1 351 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 C16orf74Q96GX8 76 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 ZNF436Q9C0F3 470 aaPredicted RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 RSL24D1Q9UHA3 163 aaKnown RBP1.85□□□□□ -2.11
MCF2-204ENST00000414978 INSIG2Q9Y5U4 225 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 CRYBG3Q68DQ2 2970 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 CENPEQ02224 2701 aa1.85□□□□□ -2.11
MCF2-204ENST00000414978 TET2Q6N021 2002 aaPredicted RBP1.84□□□□□ -2.11
MCF2-204ENST00000414978 A0A087WUU8 490 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 IGKV3D-11A0A0A0MRZ8 115 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 EFCAB10A6NFE3 127 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 LINC01619G3V211 115 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 H3BSA7 217 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 TCF21O43680 179 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 REM1O75628 298 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 HPRT1P00492 218 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 CXCL5P42830 114 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 COPZ1P61923 177 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 S100A12P80511 92 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF141Q15928 474 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 CDNFQ49AH0 187 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZC2HC1BQ5TFG8 222 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ELP2Q6IA86 826 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF613Q6PF04 617 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 TEX43Q6ZNM6 134 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 SHISA6Q6ZSJ9 500 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 SSX7Q7RTT5 188 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 PDPNQ86YL7 162 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF440Q8IYI8 595 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZFP62Q8NB50 900 aaPredicted RBP1.84□□□□□ -2.11
MCF2-204ENST00000414978 MORN4Q8NDC4 146 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 OR52L1Q8NGH7 329 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 OR6N1Q8NGY5 312 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 CEP19Q96LK0 163 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 REG4Q9BYZ8 158 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 UBQLN4Q9NRR5 601 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 TVP23BQ9NYZ1 205 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF222Q9UK12 451 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 SLC35A3Q9Y2D2 325 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 MED31Q9Y3C7 131 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 FAM215AQ9Y5M1 114 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 HERC2O95714 4834 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 PRKDCP78527 4128 aaKnown RBP1.84□□□□□ -2.11
MCF2-204ENST00000414978 TINCRA0A1B0GVN0 87 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 SMIM9A6NGZ8 99 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 INS-IGF2F8WCM5 200 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 M0R129 80 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 KPNA4O00629 521 aaPredicted RBP1.84□□□□□ -2.11
MCF2-204ENST00000414978 ZNF207O43670 478 aaKnown RBP1.84□□□□□ -2.11
MCF2-204ENST00000414978 CHP2O43745 196 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 PPBPP02775 128 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 REG1AP05451 166 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 IFI30P13284 250 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 PSMB9P28065 219 aa1.84□□□□□ -2.11
MCF2-204ENST00000414978 OMPP47874 163 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms