RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 C11orf40Q8WZ69 217 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 LZICQ8WZA0 190 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 SLC7A6Q92536 515 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 UBE2WQ96B02 151 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 SPIN2AQ99865 258 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 SPIN2BQ9BPZ2 258 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 EFCAB11Q9BUY7 163 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 C1orf50Q9BV19 199 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 CHST6Q9GZX3 395 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 LRTM1Q9HBL6 345 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 ANAPC11Q9NYG5 84 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 SNX12Q9UMY4 172 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 DCAF1Q9Y4B6 1507 aa2.85□□□□□ -1.95
BRCA1-204ENST00000412061 ATG2BQ96BY7 2078 aa2.84□□□□□ -1.95
BRCA1-204ENST00000412061 ZNF638Q14966 1978 aaKnown RBP2.84□□□□□ -1.95
BRCA1-204ENST00000412061 TRBV24-1A0A075B6N3 115 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 IGKV1OR2-108A0A075B7D4 117 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 I3L521 148 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 LECT2O14960 151 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 SLC25A20O43772 301 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 MED6O75586 246 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 IFNA7P01567 189 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 IL4P05112 153 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 CSN2P05814 226 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 OR10J4P0C629 311 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 GZMHP20718 246 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 PSMD8P48556 350 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 RWDD2BP57060 319 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 TSPEAR-AS2P59090 65 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 FKBP1AP62942 108 aaKnown RBP2.84□□□□□ -1.96
BRCA1-204ENST00000412061 FUT5Q11128 374 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 SLC25A34Q6PIV7 304 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 ZFP2Q6ZN57 461 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 SSX8Q7RTT4 187 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 EXOC3-AS1Q8N2X6 119 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 CD200R1Q8TD46 325 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 STARD4Q96DR4 205 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 EFCAB1Q9HAE3 211 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 TVP23BQ9NYZ1 205 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 OR5V1Q9UGF6 321 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 KIF13BQ9NQT8 1826 aa2.84□□□□□ -1.96
BRCA1-204ENST00000412061 ADAMTSL1Q8N6G6 1762 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 IGKV6D-41A0A0C4DH26 115 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 TMEM269A0A1B0GVZ9 245 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 A8MUU9 505 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 J3QRK9 145 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 SLC17A3O00476 420 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 KPNA4O00629 521 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-204ENST00000412061 TFPTP0C1Z6 253 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 NPPCP23582 126 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 S100A7P31151 101 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 G6PCP35575 357 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 KRTAP10-3P60369 221 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 RPL30P62888 115 aaKnown RBP2.83□□□□□ -1.96
BRCA1-204ENST00000412061 ZNF816Q0VGE8 651 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-204ENST00000412061 BAMBIQ13145 260 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 LGALS9BQ3B8N2 356 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 CCDC153Q494R4 210 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 C2orf83Q53S99 150 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 LGALS9CQ6DKI2 356 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 Q6Q795 121 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 SPATA12Q7Z6I5 190 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 OR5J2Q8NH18 312 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 MBD3L1Q8WWY6 194 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 TOMM6Q96B49 74 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 MALSU1Q96EH3 234 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 C20orf27Q9GZN8 174 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 TMEM138Q9NPI0 162 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 MED11Q9P086 117 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 TP73-AS1Q9UF72 201 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 U3KQK5 164 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 TONSLQ96HA7 1378 aa2.83□□□□□ -1.96
BRCA1-204ENST00000412061 COL27A1Q8IZC6 1860 aaPredicted RBP2.83□□□□□ -1.96
BRCA1-204ENST00000412061 SCN4AP35499 1836 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 PLXND1Q9Y4D7 1925 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 THADAQ6YHU6 1953 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 NEO1Q92859 1461 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 TRBV19A0A075B6N1 114 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 IGKV1D-43A0A0B4J1Z2 117 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 RIIAD1A6NNX1 92 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 A8MWP6 167 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 WISP3O95389 354 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-204ENST00000412061 IGLV7-43P04211 117 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 CISD3P0C7P0 127 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 GABRA2P47869 451 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 EMP1P54849 157 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 PIGPP57054 158 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 PSPHP78330 225 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 ZNF616Q08AN1 781 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 LDLRAD2Q5SZI1 272 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 RASL11AQ6T310 242 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 C16orf47Q6ZP98 133 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-204ENST00000412061 PLEKHB2Q96CS7 222 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 C11orf1Q9H5F2 150 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 OR52A1Q9UKL2 312 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 KLK5Q9Y337 293 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-204ENST00000412061 AMMECR1Q9Y4X0 333 aaPredicted RBP2.82□□□□□ -1.96
BRCA1-204ENST00000412061 ASB4Q9Y574 426 aa2.82□□□□□ -1.96
BRCA1-204ENST00000412061 VIRMAQ69YN4 1812 aaKnown RBP2.82□□□□□ -1.96
BRCA1-204ENST00000412061 ABCC12Q96J65 1359 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms