RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 BSCL2Q96G97 398 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 C18orf15Q96N68 181 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 ATP6V0BQ99437 205 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 RNF2Q99496 336 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CMSS1Q9BQ75 279 aaKnown RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 GINS4Q9BRT9 223 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 NICN1Q9BSH3 213 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 HDHD3Q9BSH5 251 aaPredicted RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 URM1Q9BTM9 101 aaKnown RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CABLES2Q9BTV7 478 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 CENPOQ9BU64 300 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 SCRT1Q9BWW7 348 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TM2D1Q9BX74 207 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 MED4Q9NPJ6 270 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM14BQ9NUH8 114 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 MRPS18AQ9NVS2 196 aaKnown RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 C21orf62Q9NYP8 219 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 AASSQ9UDR5 926 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 SMPXQ9UHP9 88 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 AK3Q9UIJ7 227 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TBC1D24Q9ULP9 559 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 HSF4Q9ULV5 492 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 POMPQ9Y244 141 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 MRPS7Q9Y2R9 242 aaKnown RBP1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 PRELID3BQ9Y3B1 194 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMED3Q9Y3Q3 217 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 ORC6Q9Y5N6 252 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 X6R8D5 127 aa1.7□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGHV3OR16-13A0A075B7E8 117 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGHV3OR16-8A0A075B7F1 116 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGHV3-49A0A0A0MS15 119 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGHV3-74A0A0B4J1X5 117 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRAV2A0A0B4J234 112 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGHV7-4-1A0A0J9YVY3 117 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 NBDYA0A0U1RRE5 68 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 TEX48A0A1B0GUV7 120 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 IRGMA1A4Y4 181 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM189A5PLL7 270 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR2T8A6NH00 312 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM14DPA8MWL7 114 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 E7EUB6 86 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 F8W735 103 aaPredicted RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 RAB27BO00194 218 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 NUPL2O15504 423 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 SOCS1O15524 211 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF207O43670 478 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 SLC22A5O76082 557 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 YIF1AO95070 293 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 LALBAP00709 142 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 ALPLP05186 524 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 REG1AP05451 166 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 EIF4EP06730 217 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 CTSGP08311 255 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 GIG44P09565 113 aaPredicted RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 HLA-GP17693 338 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 GABRB1P18505 474 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 ETV1P50549 477 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 TMEM50BP56557 158 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 TAS2R43P59537 309 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR2B8PP59922 312 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 NUTF2P61970 127 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 RPL11P62913 178 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 UNC119Q13432 240 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZIK1Q3SY52 487 aaPredicted RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 Q56UQ5 140 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 IGSF11Q5DX21 431 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 FAM90A2PQ658T7 463 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 SLC25A24Q6NUK1 477 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZNF66Q6ZN08 573 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 KCTD9Q7L273 389 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 TCF24Q7RTU0 167 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 HSD17B13Q7Z5P4 300 aaPredicted RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 TRPT1Q86TN4 253 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 PUSL1Q8N0Z8 303 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 LYPD1Q8N2G4 141 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 FAM89BQ8N5H3 189 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 ZFP41Q8N8Y5 198 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 C15orf53Q8NAA6 179 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 UBAC2Q8NBM4 344 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 DUSP18Q8NEJ0 188 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR4S2Q8NH73 311 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 RHOXF1Q8NHV9 184 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 SCARB1Q8WTV0 552 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 DGCR14Q96DF8 476 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 C5orf30Q96GV9 206 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 CENPNQ96H22 339 aaPredicted RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 OR10C1Q96KK4 312 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 PGLYRP3Q96LB9 341 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 DERL3Q96Q80 235 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 HSD17B10Q99714 261 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 SRSF8Q9BRL6 282 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 AIFM2Q9BRQ8 373 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 GINS3Q9BRX5 216 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 ATG101Q9BSB4 218 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 C1QTNF4Q9BXJ3 329 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 YTHDF1Q9BYJ9 559 aaKnown RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 COMMD5Q9GZQ3 224 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 LPAR5Q9H1C0 372 aa1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 FGF20Q9NP95 211 aaPredicted RBP1.69□□□□□ -2.14
RNU4-53P-201ENST00000410828 CLEC5AQ9NY25 188 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms