RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 ENY2Q9NPA8 101 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 KCNIP2Q9NS61 270 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 RPRMQ9NS64 109 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 CBLN4Q9NTU7 201 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 CTSZQ9UBR2 303 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 RALYQ9UKM9 306 aaKnown RBP6.11□□□□□ -1.43
CXCR4-202ENST00000409817 TCF19Q9Y242 345 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 DIDO1Q9BTC0 2240 aaKnown RBP6.11□□□□□ -1.43
CXCR4-202ENST00000409817 IGF2RP11717 2491 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 hCG_1809904A0A1W2PP81 198 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 A0A1W2PPE2 198 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 A0A1W2PR64 198 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 A0A1W2PRV1 198 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 J3QR06 171 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 DNASE2O00115 360 aaPredicted RBP6.11□□□□□ -1.43
CXCR4-202ENST00000409817 UPK2O00526 184 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 IFNA1P01562 189 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 IFNA10P01566 189 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 IGHV2-70P01814 119 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 CCL3L1P16619 93 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 CD1BP29016 333 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 MC5RP33032 325 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 HOXA1P49639 335 aaPredicted RBP6.11□□□□□ -1.43
CXCR4-202ENST00000409817 RAB13P51153 203 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 ZNF506Q5JVG8 444 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 LYPD2Q6UXB3 125 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 PDPNQ86YL7 162 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 OR10X1Q8NGY0 326 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 OR5B3Q8NH48 314 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 C8orf46Q8TAG6 207 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 NEIL1Q96FI4 390 aaPredicted RBP6.11□□□□□ -1.43
CXCR4-202ENST00000409817 TIMD4Q96H15 378 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 MIOXQ9UGB7 285 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 WDR83OSQ9Y284 106 aa6.11□□□□□ -1.43
CXCR4-202ENST00000409817 ROS1P08922 2347 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 C9JQL5 133 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 INS-IGF2F8WCM5 200 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 H7C2Y5 167 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 FCN3O75636 299 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 IGHV1-8P0DP01 117 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 FGF7P21781 194 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 PAX6P26367 422 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 UTF1Q5T230 341 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.1□□□□□ -1.43
CXCR4-202ENST00000409817 OR4C13Q8NGP0 309 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 CLDND2Q8NHS1 167 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 C17orf50Q8WW18 174 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 RAB1CQ92928 201 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 ST6GALNAC6Q969X2 333 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 P2RX4Q99571 388 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 NPCDR1Q9BY65 106 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 ANKHD1Q8IWZ3 2542 aaKnown RBP6.1□□□□□ -1.43
CXCR4-202ENST00000409817 PKDREJQ9NTG1 2253 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 DCHS1Q96JQ0 3298 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 BOD1L1Q8NFC6 3051 aa6.1□□□□□ -1.43
CXCR4-202ENST00000409817 YLPM1P49750 1951 aaKnown RBP6.09□□□□□ -1.43
CXCR4-202ENST00000409817 CTXND1A0A1B0GTU2 59 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 H0YJW9 148 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 TSPAN4O14817 238 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 KBTBD11O94819 623 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 USF1P22415 310 aaPredicted RBP6.09□□□□□ -1.43
CXCR4-202ENST00000409817 NPY1RP25929 384 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 PRRX1P54821 245 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 PRCDQ00LT1 54 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 RHEBQ15382 184 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 TMEM249Q2WGJ8 235 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 ACOT6Q3I5F7 207 aaPredicted RBP6.09□□□□□ -1.43
CXCR4-202ENST00000409817 SOHLH1Q5JUK2 328 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 C11orf71Q6IPW1 123 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 RBMS3Q6XE24 437 aaKnown RBP6.09□□□□□ -1.43
CXCR4-202ENST00000409817 DTX2Q86UW9 622 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 VKORC1L1Q8N0U8 176 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 BCL6BQ8N143 479 aaPredicted RBP6.09□□□□□ -1.43
CXCR4-202ENST00000409817 SLC24A4Q8NFF2 622 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 OR8B3Q8NGG8 313 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 LHX4Q969G2 390 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 FLYWCH2Q96CP2 140 aaKnown RBP6.09□□□□□ -1.43
CXCR4-202ENST00000409817 OR8B2Q96RD0 313 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 ACTR3CQ9C0K3 210 aaPredicted RBP6.09□□□□□ -1.43
CXCR4-202ENST00000409817 TMEM133Q9H2Q1 129 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 PLEKHA3Q9HB20 300 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 SLC39A9Q9NUM3 307 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 WASHC3Q9Y3C0 194 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 OR51B2Q9Y5P1 312 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 RFNGQ9Y644 331 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 DOCK11Q5JSL3 2073 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 DMXL2Q8TDJ6 3036 aa6.09□□□□□ -1.43
CXCR4-202ENST00000409817 TRAV3A0A0B4J244 114 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 LOC102723971A0A1B0GUV8 181 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 MAP1LC3B2A6NCE7 125 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 PRSS46E5RG02 174 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 CYB5BO43169 146 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 BCL2P10415 239 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 COL8A2P25067 703 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 LGALS7P47929 136 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 NPBWR1P48145 328 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 CCL20P78556 96 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 RAB31Q13636 194 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 LY6DQ14210 128 aa6.09□□□□□ -1.44
CXCR4-202ENST00000409817 CDSNQ15517 529 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms