RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 PARP12Q9H0J9 701 aaKnown RBP3.42□□□□□ -1.86
GTDC1-206ENST00000409214 PRTFDC1Q9NRG1 225 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 CALYQ9NYX4 217 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 RBM12B-AS1Q9P1G2 102 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 SPRR3Q9UBC9 169 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 NOP16Q9Y3C1 178 aaKnown RBP3.42□□□□□ -1.86
GTDC1-206ENST00000409214 MAP1BP46821 2468 aaKnown RBP3.42□□□□□ -1.86
GTDC1-206ENST00000409214 CABIN1Q9Y6J0 2220 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 A0A1B0GV50 99 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 LINC00862A6NCI5 91 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 TMEM235A6NFC5 223 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 OR5H14A6NHG9 310 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 F5H5P2 479 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 G3V3Q6 166 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 GABARAPH6UMI1 98 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 TNFSF12O43508 249 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 TCF21O43680 179 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 GALR3O60755 368 aaPredicted RBP3.42□□□□□ -1.86
GTDC1-206ENST00000409214 HPRT1P00492 218 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 NUDT1P36639 197 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 RPL18Q07020 188 aaKnown RBP3.42□□□□□ -1.86
GTDC1-206ENST00000409214 FHL1Q13642 323 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 IZUMO4Q1ZYL8 232 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 OR10G7Q8NGN6 311 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 FNDC9Q8TBE3 224 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 IL22RA2Q969J5 263 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 TAS2R4Q9NYW5 299 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 HEBP2Q9Y5Z4 205 aa3.42□□□□□ -1.86
GTDC1-206ENST00000409214 DENND4CQ5VZ89 1909 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 TRAV1-2A0A0B4J238 106 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 P01737 135 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 S100A11P31949 105 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 GFERP55789 205 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 GAGE5Q13069 117 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 GAGE6Q13070 117 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 Q499Y3 187 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 WDR38Q5JTN6 314 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 PDZD9Q8IXQ8 264 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 ZNRF2Q8NHG8 242 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 FAM3DQ96BQ1 224 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 EDA2RQ9HAV5 297 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 ASF1BQ9NVP2 202 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 MED11Q9P086 117 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 COPZ2Q9P299 210 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 PRNDQ9UKY0 176 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 ALPK3Q96L96 1907 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 KIAA1671Q9BY89 1806 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 TRAV8-4A0A0B4J246 113 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 IGHV4-61A0A0C4DH41 118 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 YIF1AO95070 293 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 RENP00797 406 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 IGHV4-59P01825 116 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 PMP2P02689 132 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 NMBP08949 121 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 TCN2P20062 427 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 RPL29P47914 159 aaKnown RBP3.41□□□□□ -1.86
GTDC1-206ENST00000409214 TCTAP57738 103 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 SRSF4Q08170 494 aaKnown RBP3.41□□□□□ -1.86
GTDC1-206ENST00000409214 HIST3H3Q16695 136 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 DEFB133Q30KQ1 61 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 LCN12Q6JVE5 192 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 ZNF550Q7Z398 422 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 TSTD1Q8NFU3 115 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 TSPAN32Q96QS1 320 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 LINC01587Q99440 93 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 TMPRSS5Q9H3S3 457 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 ASXL3Q9C0F0 2248 aa3.41□□□□□ -1.86
GTDC1-206ENST00000409214 TDRD6O60522 2096 aaKnown RBP3.4□□□□□ -1.86
GTDC1-206ENST00000409214 DYSFO75923 2080 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 IGKV1D-42A0A075B6H8 117 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 IGLV5-45A0A087WSX0 123 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 IGHV1OR21-1A0A087WYE8 117 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 SMIM26A0A096LP01 95 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 A0A0B4J2A0 478 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 GGT3PA6NGU5 568 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 EPOPA6NHQ4 379 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 E9PLD3 99 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 NDUFB6O95139 128 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 TNFP01375 233 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 ATP5G1P05496 136 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 CD14P08571 375 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 OR8U8P0C7N1 319 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 VDAC1P21796 283 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 RIPPLY3P57055 190 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 LINC00242Q5T6M2 205 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 TSPO2Q5TGU0 170 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 Q6ZS52 159 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 LRRTM1Q86UE6 522 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 LMX1AQ8TE12 382 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 PIK3IP1Q96FE7 263 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 SLC25A44Q96H78 314 aaPredicted RBP3.4□□□□□ -1.86
GTDC1-206ENST00000409214 TBL1XR1Q9BZK7 514 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 SHPKQ9UHJ6 478 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 RAB22AQ9UL26 194 aa3.4□□□□□ -1.86
GTDC1-206ENST00000409214 MDC1Q14676 2089 aaKnown RBP3.4□□□□□ -1.86
GTDC1-206ENST00000409214 TRANK1O15050 2925 aa3.4□□□□□ -1.87
GTDC1-206ENST00000409214 A0A0J9YY10 115 aa3.4□□□□□ -1.87
GTDC1-206ENST00000409214 PQLC2LA1A4F0 135 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms