RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 CDS2O95674 445 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 HLA-AP01891 365 aaKnown RBP8.31□□□□□ -1.08
RPAIN-204ENST00000405578 H2AFB2P0C5Z0 115 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 HLA-GP17693 338 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 DCTN2Q13561 401 aaKnown RBP8.31□□□□□ -1.08
RPAIN-204ENST00000405578 TMEM268Q5VZI3 342 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 PLET1Q6UQ28 207 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 Q6ZS46 218 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 FAM219AQ8IW50 185 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 STPG2Q8N412 459 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 COMMD1Q8N668 190 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 KLHDC1Q8N7A1 406 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 OR4A16Q8NH70 328 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 COQ8AQ8NI60 647 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 GRPEL2Q8TAA5 225 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 GLYATL2Q8WU03 294 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 TMEM230Q96A57 120 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 TMEM68Q96MH6 324 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 TMEM56Q96MV1 263 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 HSPB9Q9BQS6 159 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 ALX4Q9H161 411 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-204ENST00000405578 TPSG1Q9NRR2 321 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 SERTAD4Q9NUC0 356 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 ZNF580Q9UK33 172 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 PRNDQ9UKY0 176 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 TMEM56-RWDD3S4R434 201 aa8.31□□□□□ -1.08
RPAIN-204ENST00000405578 TRAV6A0A075B6T7 132 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 TRAV41A0A0B4J266 112 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 ATP6V0E1O15342 81 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 SFT2D2O95562 160 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 OR4E1P0C645 316 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 RPL27AP46776 148 aaKnown RBP8.3□□□□□ -1.08
RPAIN-204ENST00000405578 IFITM3Q01628 133 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 PJVKQ0ZLH3 352 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 PPP1R1AQ13522 171 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 TMEM187Q14656 261 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 TMEM95Q3KNT9 176 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 AKIRIN2Q53H80 203 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 THOC7Q6I9Y2 204 aaKnown RBP8.3□□□□□ -1.08
RPAIN-204ENST00000405578 MRPL41Q8IXM3 137 aaKnown RBP8.3□□□□□ -1.08
RPAIN-204ENST00000405578 OR4X2Q8NGF9 303 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 CASTOR1Q8WTX7 329 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 SEC22AQ96IW7 307 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 PDCD10Q9BUL8 212 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 WNT10AQ9GZT5 417 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 CACFD1Q9UGQ2 172 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 FLVCR2Q9UPI3 526 aa8.3□□□□□ -1.08
RPAIN-204ENST00000405578 A0A0B4J2A0 478 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 DUXBA0A1W2PPF3 345 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 C9orf170A2RU37 121 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 MSGN1A6NI15 193 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 PTTG1O95997 202 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 ANXA7P20073 488 aaKnown RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 SUPT4H1P63272 117 aaKnown RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 DHRS2Q13268 280 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 ECSCRQ19T08 205 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 DMRTA1Q5VZB9 504 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 TEX38Q6PEX7 206 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 UNQ5815/PRO19632Q6UWF5 114 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 HSD17B13Q7Z5P4 300 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 NRARPQ7Z6K4 114 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 LYG2Q86SG7 212 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 SELENOHQ8IZQ5 122 aaKnown RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 DUSP18Q8NEJ0 188 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 OR5AU1Q8NGC0 362 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 OR5B3Q8NH48 314 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 SRSF12Q8WXF0 261 aaKnown RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 LSM10Q969L4 123 aaKnown RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 NOL4LQ96MY1 436 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 FYTTD1Q96QD9 318 aaKnown RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 GPN1Q9HCN4 374 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 AURKAIP1Q9NWT8 199 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 SHPKQ9UHJ6 478 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 FOXA2Q9Y261 457 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-204ENST00000405578 WSB1Q9Y6I7 421 aa8.29□□□□□ -1.08
RPAIN-204ENST00000405578 LINC01548A6NM66 108 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 FBXO24O75426 580 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 DUS4LO95620 317 aaKnown RBP8.28□□□□□ -1.08
RPAIN-204ENST00000405578 DHFRP00374 187 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 IFNA21P01568 189 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 IGKV1-39P01597 117 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 OPN1MWP04001 364 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 IGKV1D-39P04432 117 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 IL6RP08887 468 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-204ENST00000405578 OPN1MW2P0DN77 364 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 OPN1MW3P0DN78 364 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 CRIP2P52943 208 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-204ENST00000405578 NDPQ00604 133 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 CXorf66Q5JRM2 361 aaPredicted RBP8.28□□□□□ -1.08
RPAIN-204ENST00000405578 TMEM65Q6PI78 240 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 SLC35G3Q8N808 338 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 LRTM2Q8N967 370 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 LFNGQ8NES3 379 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 OR5M8Q8NGP6 311 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 OR1L8Q8NGR8 309 aa8.28□□□□□ -1.08
RPAIN-204ENST00000405578 SRSF8Q9BRL6 282 aaKnown RBP8.28□□□□□ -1.08
RPAIN-204ENST00000405578 FAM103A1Q9BTL3 118 aaKnown RBP8.28□□□□□ -1.08
RPAIN-204ENST00000405578 QTRT1Q9BXR0 403 aaKnown RBP8.28□□□□□ -1.08
RPAIN-204ENST00000405578 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms