RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 BUB1B-PAK6H3BSN5 160 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 MED6O75586 246 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 IGLV1-47P01700 117 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 UCP1P25874 307 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 DVL1P1P54792 670 aaPredicted RBP9.44□□□□□ -0.9
SKA3-203ENST00000400018 LGALS4P56470 323 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 HLA-DRB5Q30154 266 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 BCL6BQ8N143 479 aaPredicted RBP9.44□□□□□ -0.9
SKA3-203ENST00000400018 OR9G1Q8NH87 305 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 HINT2Q9BX68 163 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 RFNGQ9Y644 331 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 FN1P02751 2386 aaKnown RBP9.44□□□□□ -0.9
SKA3-203ENST00000400018 E7EUB6 86 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 H0Y980 276 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 AP4M1O00189 453 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 MBPP02686 304 aaPredicted RBP9.44□□□□□ -0.9
SKA3-203ENST00000400018 F2RL1P55085 397 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 ZNF546Q86UE3 836 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 LGI3Q8N145 548 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 ISOC2Q96AB3 205 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 C2orf88Q9BSF0 95 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 LINC00574Q9H8X3 128 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 FAM96BQ9Y3D0 163 aa9.44□□□□□ -0.9
SKA3-203ENST00000400018 TIMM23O14925 209 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 TMEM50AO95807 157 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 LPCAT3Q6P1A2 487 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 ST6GALNAC6Q969X2 333 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 S1PR3Q99500 378 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 SLC35D1Q9NTN3 355 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 CENPVL3A0A0U1RRI6 287 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 hCG_1809904A0A1W2PP81 198 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 A0A1W2PR64 198 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 A0A1W2PRV1 198 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 MARCH11A6NNE9 402 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 SSSCA1O60232 199 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 SAA4P35542 130 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 TMEM219Q86XT9 240 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 C15orf54Q8N8G6 183 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 DTD1Q8TEA8 209 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 DDB2Q92466 427 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 R3HDM4Q96D70 268 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 RNF126Q9BV68 326 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 SEC11CQ9BY50 192 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 SMCO4Q9NRQ5 59 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 UQCC1Q9NVA1 299 aa9.43□□□□□ -0.9
SKA3-203ENST00000400018 MSMBP08118 114 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 RAB4BP61018 213 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 GAMTQ14353 236 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 HES1Q14469 280 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 C8orf46Q8TAG6 207 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 RPEQ96AT9 228 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 RAB39BQ96DA2 213 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 NABP2Q9BQ15 211 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 QTRT1Q9BXR0 403 aaKnown RBP9.42□□□□□ -0.9
SKA3-203ENST00000400018 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 IFITM10A6NMD0 228 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 H0YJW9 148 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 ECI1P42126 302 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 RND3P61587 244 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 INSIG2Q9Y5U4 225 aa9.42□□□□□ -0.9
SKA3-203ENST00000400018 IGHV1-3A0A0C4DH29 117 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 SLC25A17O43808 307 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 SNRPCP09234 159 aaKnown RBP9.41□□□□□ -0.9
SKA3-203ENST00000400018 PRTN3P24158 256 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 NUTF2P61970 127 aaKnown RBP9.41□□□□□ -0.9
SKA3-203ENST00000400018 TMEM249Q2WGJ8 235 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 NMSQ5H8A3 153 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 KLF17Q5JT82 389 aaPredicted RBP9.41□□□□□ -0.9
SKA3-203ENST00000400018 HIST2H2BDQ6DRA6 164 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 OR13D1Q8NGV5 346 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 DCUN1D4Q92564 292 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 TMEM56Q96MV1 263 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 LIN7CQ9NUP9 197 aaKnown RBP9.41□□□□□ -0.9
SKA3-203ENST00000400018 RCL1Q9Y2P8 373 aaKnown RBP9.41□□□□□ -0.9
SKA3-203ENST00000400018 TMEM56-RWDD3S4R434 201 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 F8P00451 2351 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 A0A0U1RQK1 487 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 FCN1O00602 326 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 HIST1H1BP16401 226 aaKnown RBP9.41□□□□□ -0.9
SKA3-203ENST00000400018 RAB5CP51148 216 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 LY6EQ16553 131 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 ZNF833PQ6ZTB9 187 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 AJUBAQ96IF1 538 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 AKR1E2Q96JD6 320 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 FAM103A1Q9BTL3 118 aaKnown RBP9.41□□□□□ -0.9
SKA3-203ENST00000400018 RAB18Q9NP72 206 aa9.41□□□□□ -0.9
SKA3-203ENST00000400018 FOXH1O75593 365 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 IFNA21P01568 189 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 IGKV1D-33P01593 117 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 IGKV1-33P01594 117 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 IGHV3-48P01763 117 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 REG1AP05451 166 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 RAB7AP51149 207 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 GNB1P62873 340 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 OR10W1Q8NGF6 305 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 C2orf50Q96LR7 162 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 HARBI1Q96MB7 349 aa9.4□□□□□ -0.9
SKA3-203ENST00000400018 HSD17B10Q99714 261 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms