RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 GEMIN7Q9H840 131 aaKnown RBP7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 F8VVB4 439 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 F8VWA3 439 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 YPEL1O60688 119 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 HTN1P15515 57 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 ZNF56Q15929 161 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 FAM57AQ8TBR7 257 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 RCC1LQ96I51 464 aaKnown RBP7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 PRELID3AQ96N28 172 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 YPEL2Q96QA6 119 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 DPRXA6NFQ7 191 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 THY1P04216 161 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 AICDAQ9GZX7 198 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 SDF2L1Q9HCN8 221 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 PLXNA1Q9UIW2 1896 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 ZNF638Q14966 1978 aaKnown RBP7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 SLC25A2Q9BXI2 301 aa7.08□□□□□ -1.28
SPTLC3-201ENST00000399002 TRBV20OR9-2A0A075B6H5 130 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 CFHR1Q03591 330 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 GOLT1AQ6ZVE7 132 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 TNFRSF14Q92956 283 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 TRBV6-7A0A0A0MS04 114 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 OR11H12B2RN74 326 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 RNF224P0DH78 156 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 PNKDQ8N490 385 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 OR11H1Q8NG94 326 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 OR11H2Q8NH07 326 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 PEMTQ9UBM1 199 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 IGLV3-12A0A075B6K2 115 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 C1QL1O75973 258 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 MOSP00540 346 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 ACSF3Q4G176 576 aaPredicted RBP7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 CDCP2Q5VXM1 449 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 REPIN1Q9BWE0 567 aaKnown RBP7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 MRPL13Q9BYD1 178 aaKnown RBP7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 C7orf71A4D174 169 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 NKX2-8O15522 239 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 ZNF525Q8N782 197 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 TMEM170AQ8WVE7 144 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 NPIPB3Q92617 1050 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 ARPC1AQ92747 370 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 ANKRD12Q6UB98 2062 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 TTC3P53804 2025 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 C1QTNF9BB2RNN3 333 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 C12orf77C9JDV5 145 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 J3QRE1 110 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 SIGLEC5O15389 551 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 MEIG1Q5JSS6 88 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 ATP5L2Q7Z4Y8 100 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 OR52E5Q8NH55 327 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 DPM3Q9P2X0 92 aa7.07□□□□□ -1.28
SPTLC3-201ENST00000399002 A0A1B0GUT8 65 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 CSRP2Q16527 193 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 MRAP2Q96G30 205 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 GDF15Q99988 308 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 RTN4RQ9BZR6 473 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 TMEM242Q9NWH2 141 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 LOC102723996A0A087X1L8 192 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 LOC101059948A0A1B0GTJ6 334 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 CHCHD1Q96BP2 118 aaKnown RBP7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 YAE1D1Q9NRH1 226 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 IGHV3-72A0A0B4J1Y9 119 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 IGHV2OR16-5A0A0B4J2B6 119 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 C15orf61A6NNL5 157 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 PRSS2P07478 247 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 TTC9CQ8N5M4 171 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 ASCL2Q99929 193 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 MYO10Q9HD67 2058 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 RBMY1BA6NDE4 496 aaKnown RBP7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 RBMY1EA6NEQ0 496 aaKnown RBP7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 UPK2O00526 184 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 NBEAP1P0C6P0 100 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 RBMY1DP0C7P1 496 aaKnown RBP7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 RBMY1A1P0DJD3 496 aaKnown RBP7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 RBMY1CP0DJD4 496 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 SPINK2P20155 84 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 RASL11AQ6T310 242 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 ZNF497Q6ZNH5 498 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 PPP1R27Q86WC6 154 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 OR4X2Q8NGF9 303 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 RRHO14718 337 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 HOXA5P20719 270 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 NUP205Q92621 2012 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 TNFRSF18Q9Y5U5 241 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 SIPA1L1O43166 1804 aa7.06□□□□□ -1.28
SPTLC3-201ENST00000399002 IGKV3-7A0A075B6H7 116 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 DNAL4O96015 105 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 CD69Q07108 199 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 OSTCQ9NRP0 149 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 BRCA1P38398 1863 aaKnown RBP7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 ZIC4Q8N9L1 334 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 SLC25A28Q96A46 364 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 NEU1Q99519 415 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 FOXJ2Q9P0K8 574 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 TRAV14DV4A0A0A6YYC5 116 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 CEACAM4O75871 244 aa7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 CMC4P56277 68 aaPredicted RBP7.05□□□□□ -1.28
SPTLC3-201ENST00000399002 TMEM144Q7Z5S9 345 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms