RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 ALKAL2Q6UX46 152 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 STX12Q86Y82 276 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 BAP18Q8IXM2 172 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 TEX45Q8NA69 505 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 OR1S2Q8NGQ3 325 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 SCARB1Q8WTV0 552 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 MALSU1Q96EH3 234 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 TSNAXQ99598 290 aaKnown RBP11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 HIPK2Q9H2X6 1198 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 STRAPQ9Y3F4 350 aaKnown RBP11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 ZFHX3Q15911 3703 aa11.69□□□□□ -0.54
SYNGR1-204ENST00000381535 ANKRD17O75179 2603 aaKnown RBP11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 FGF2P09038 288 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 METTL15P1P0C7V9 234 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 MYOD1P15172 320 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 HTR2BP41595 481 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 VDAC2P45880 294 aaPredicted RBP11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 TMEM14EPQ6UXP3 125 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 TMEM217Q8N7C4 229 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 OR5C1Q8NGR4 320 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 FOXC2Q99958 501 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 ENY2Q9NPA8 101 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 HEYLQ9NQ87 328 aaPredicted RBP11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 ZNF257Q9Y2Q1 563 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 AUP1Q9Y679 476 aa11.68□□□□□ -0.54
SYNGR1-204ENST00000381535 MTORP42345 2549 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 A0A096LNT2 108 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 TRAV20A0A0B4J274 112 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 SLC25A17O43808 307 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 VENTXO95231 258 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 CRYGBP07316 175 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 RAB14P61106 215 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 RPL8P62917 257 aaKnown RBP11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 RPP30P78346 268 aaKnown RBP11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 LOXL1Q08397 574 aaPredicted RBP11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 CLINT1Q14677 625 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 PSG5Q15238 335 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 Q5PR19 223 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 PRSS57Q6UWY2 283 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 DYNAPQ8N1N2 210 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 LINC01356Q8N9X3 169 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 C17orf50Q8WW18 174 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 CFHR4Q92496 578 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 PHYHIPLQ96FC7 376 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 OR4C12Q96R67 309 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 HINT2Q9BX68 163 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 REG4Q9BYZ8 158 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 C7orf69Q9H7B7 122 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 NF1P21359 2839 aa11.67□□□□□ -0.54
SYNGR1-204ENST00000381535 RNF223E7ERA6 249 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 NPFFO15130 113 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 OPN1MWP04001 364 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 OPN1MW2P0DN77 364 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 OPN1MW3P0DN78 364 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 PAX6P26367 422 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 CNTFRP26992 372 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 RIPPLY3P57055 190 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 ARL16Q0P5N6 197 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 HABP2Q14520 560 aaPredicted RBP11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 NDUFA5Q16718 116 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 UBAC2Q8NBM4 344 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 OR5B3Q8NH48 314 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 COMMD5Q9GZQ3 224 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 HIF1ANQ9NWT6 349 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 ITPR3Q14573 2671 aa11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 SETD2Q9BYW2 2564 aaPredicted RBP11.66□□□□□ -0.54
SYNGR1-204ENST00000381535 DFFBO76075 338 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 MOSP00540 346 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 IFNA10P01566 189 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 IGKV1D-33P01593 117 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 IGKV1-33P01594 117 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 GATA3P23771 443 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 HBG1P69891 147 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 HBG2P69892 147 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 PRCDQ00LT1 54 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 HNF4GQ14541 408 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 EIF5AL1Q6IS14 154 aaKnown RBP11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 HAPLN4Q86UW8 402 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 OR2T10Q8NGZ9 312 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 AJUBAQ96IF1 538 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 ATP5SQ99766 215 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 GINS3Q9BRX5 216 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 ZNF430Q9H8G1 570 aaPredicted RBP11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 SIGLEC9Q9Y336 463 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 TNCP24821 2201 aa11.65□□□□□ -0.54
SYNGR1-204ENST00000381535 ABCA2Q9BZC7 2435 aa11.65□□□□□ -0.55
SYNGR1-204ENST00000381535 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 IGHV1-69DA0A0B4J2H0 117 aa11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 PMS2P5A8MQ11 134 aa11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 IGHV1-69P01742 117 aa11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 SNRNP70P08621 437 aaKnown RBP11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 CD24P25063 80 aa11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 SAA4P35542 130 aa11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 PJVKQ0ZLH3 352 aa11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 HES1Q14469 280 aa11.64□□□□□ -0.55
SYNGR1-204ENST00000381535 ZNF266Q14584 549 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms