RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 LHX4Q969G2 390 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 PINX1Q96BK5 328 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 WFIKKN1Q96NZ8 548 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 SLC39A9Q9NUM3 307 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 DCHS2Q6V1P9 2916 aa6.54□□□□□ -1.36
PDLIM5-204ENST00000380176 A0A1B0GV90 55 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 RBFOX2O43251 390 aaKnown RBP eCLIP6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 OR2C1O95371 312 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 IRF2P14316 349 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 NQO2P16083 231 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 CD33P20138 364 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 RAB5AP20339 215 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 RPL35P42766 123 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 GCSAMLQ5JQS6 135 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 FFAR4Q5NUL3 377 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 TEX36Q5VZQ5 186 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 ZNF343Q6P1L6 599 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 ZCCHC14Q8WYQ9 949 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 SERTM2A0A1B0GWG4 89 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 IFNA10P01566 189 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 NDUFB7P17568 137 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 VDAC2P45880 294 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 RAB7AP51149 207 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 MRPS11P82912 194 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 OR10G4Q8NGN3 311 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 OR10G9Q8NGN4 311 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 OR10G7Q8NGN6 311 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 NANPQ8TBE9 248 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 TVP23CQ96ET8 276 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 NIPSNAP3BQ9BS92 247 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 HEYLQ9NQ87 328 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 TMEM160Q9NX00 188 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 IDI2-AS1Q9NZ38 188 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 ITGB1BP1O14713 200 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 GFRA3O60609 400 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 CD1BP29016 333 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 AKR1D1P51857 326 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 PRRX1P54821 245 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 ERVK-16P61578 105 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 RNF212Q495C1 297 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 OR4A47Q6IF82 309 aa6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 COL25A1Q9BXS0 654 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-204ENST00000380176 FAM90A9PA6NNJ1 464 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 PRSS46E5RG02 174 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 IGKV1-16P04430 117 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 CCL3L1P16619 93 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 AGAP20933 346 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 COL8A2P25067 703 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 CD81P60033 236 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 SNRPEP62304 92 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 LYPD2Q6UXB3 125 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 OR4S2Q8NH73 311 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 CCL17Q92583 94 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 SSX3Q99909 188 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 BIN3Q9NQY0 253 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 VAX2Q9UIW0 290 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 TCF19Q9Y242 345 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 NBASA2RRP1 2371 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 SPTA1P02549 2419 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 SRRM4A7MD48 611 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 C1orf196B1AJZ1 125 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 S100A8P05109 93 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 CT45A6P0DMU7 189 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 CT45A5P0DMU8 189 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 CT45A7P0DMV0 189 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 TNFRSF1AP19438 455 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 RAB5BP61020 215 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 UNQ6494/PRO21346Q6UXR6 183 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 OR52E5Q8NH55 327 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 CORO2AQ92828 525 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 LINC00574Q9H8X3 128 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 SAP30LQ9HAJ7 183 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 SLC25A10Q9UBX3 287 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 RPUSD1Q9UJJ7 312 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 TACC2O95359 2948 aa6.52□□□□□ -1.37
PDLIM5-204ENST00000380176 ATRXP46100 2492 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 CTXND1A0A1B0GTU2 59 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 SMCO3A2RU48 225 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 C15orf61A6NNL5 157 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 SHISA9B4DS77 424 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 CXCL1P09341 107 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 PDLIM3Q53GG5 364 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 TREML4Q6UXN2 200 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 HEPN1Q6WQI6 88 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 SLC25A48Q6ZT89 311 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 SLC35E3Q7Z769 313 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 Q8WTZ3 238 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 RND1Q92730 232 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 WDR83OSQ9Y284 106 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 TRAV38-1A0A0B4J264 116 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 E7EQL1 145 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 TMEM178BH3BS89 294 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 STAG3L3P0CL85 134 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 MAS1LP35410 378 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 KIR2DS2P43631 304 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 THBS3P49746 956 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 ELOBQ15370 118 aa6.51□□□□□ -1.37
PDLIM5-204ENST00000380176 ZNF709Q8N972 641 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms