RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 TET2Q6N021 2002 aaPredicted RBP10.47□□□□□ -0.73
TRIM40-206ENST00000376724 OVOL3O00110 214 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 GATCO43716 136 aaKnown RBP10.47□□□□□ -0.73
TRIM40-206ENST00000376724 RBP4P02753 201 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 VDAC2P45880 294 aaPredicted RBP10.47□□□□□ -0.73
TRIM40-206ENST00000376724 RAB5CP51148 216 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 F2RL1P55085 397 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 HSPE1P61604 102 aaKnown RBP10.47□□□□□ -0.73
TRIM40-206ENST00000376724 LRRC75BQ2VPJ9 315 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 TMEM88Q6PEY1 159 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 PDPNQ86YL7 162 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 PUSL1Q8N0Z8 303 aaKnown RBP10.47□□□□□ -0.73
TRIM40-206ENST00000376724 CCL19Q99731 98 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 BPESC1Q9GZL8 116 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 ENY2Q9NPA8 101 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 PRNDQ9UKY0 176 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 FLNCQ14315 2725 aa10.47□□□□□ -0.73
TRIM40-206ENST00000376724 TMEM218A2RU14 115 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 RAB19A4D1S5 217 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 RRHO14718 337 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 KBTBD11O94819 623 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 TSPAN15O95858 294 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 S100A8P05109 93 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 OR8U8P0C7N1 319 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 ZFP36P26651 326 aaKnown RBP10.46□□□□□ -0.73
TRIM40-206ENST00000376724 RPP30P78346 268 aaKnown RBP10.46□□□□□ -0.73
TRIM40-206ENST00000376724 LCN2P80188 198 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 PJVKQ0ZLH3 352 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 PDLIM3Q53GG5 364 aaPredicted RBP10.46□□□□□ -0.73
TRIM40-206ENST00000376724 TMEM177Q53S58 311 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 AKR1C8PQ5T2L2 129 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 MOB3BQ86TA1 216 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 OR4P4Q8NGL7 312 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 PINX1Q96BK5 328 aaKnown RBP10.46□□□□□ -0.73
TRIM40-206ENST00000376724 RITA1Q96K30 269 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 WDR61Q9GZS3 305 aaKnown RBP10.46□□□□□ -0.73
TRIM40-206ENST00000376724 INSIG2Q9Y5U4 225 aa10.46□□□□□ -0.73
TRIM40-206ENST00000376724 A0A1W2PRD5 423 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 A0A1W2PRF3 423 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 A0A1W2PRM7 423 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 IGHV4-39P01824 125 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 ARG1P05089 322 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.74
TRIM40-206ENST00000376724 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.74
TRIM40-206ENST00000376724 TLE4Q04727 773 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 KLRD1Q13241 179 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 IL34Q6ZMJ4 242 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 BEND2Q8NDZ0 799 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 RPEQ96AT9 228 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 PCGF1Q9BSM1 259 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 TREM1Q9NP99 234 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 UQCC1Q9NVA1 299 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 BET1LQ9NYM9 111 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 FAM96BQ9Y3D0 163 aa10.46□□□□□ -0.74
TRIM40-206ENST00000376724 ZNF462Q96JM2 2506 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 TEX50A0A1B0GTY4 177 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 UMAD1C9J7I0 102 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 IGHV2-5P01817 119 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 MC5RP33032 325 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 ATP6V1FQ16864 119 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 TAF15Q92804 592 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRIM40-206ENST00000376724 TMEM147Q9BVK8 224 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 TACC2O95359 2948 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 IGHV1-3A0A0C4DH29 117 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 NUDT19A8MXV4 375 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 ETV3LQ6ZN32 361 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 OR51M1Q9H341 326 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 PLEKHA3Q9HB20 300 aa10.45□□□□□ -0.74
TRIM40-206ENST00000376724 AMMECR1Q9Y4X0 333 aaPredicted RBP10.45□□□□□ -0.74
TRIM40-206ENST00000376724 DOPEY1Q5JWR5 2465 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 USP9XQ93008 2570 aaPredicted RBP10.44□□□□□ -0.74
TRIM40-206ENST00000376724 EPG5Q9HCE0 2579 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 A1L4Q6 167 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 SMCO3A2RU48 225 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 M0R1W7 72 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 SLC25A17O43808 307 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 LY86O95711 162 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 IGLV2-23P01705 113 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 CRYBA1P05813 215 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 FGF7P21781 194 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 ELLP55199 621 aaPredicted RBP10.44□□□□□ -0.74
TRIM40-206ENST00000376724 RPL8P62917 257 aaKnown RBP10.44□□□□□ -0.74
TRIM40-206ENST00000376724 C10orf91Q5T1B1 145 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 CLDND2Q8NHS1 167 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 LYPD6BQ8NI32 183 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 C2CD4CQ8TF44 421 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 TMEM170AQ8WVE7 144 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 SPOCK3Q9BQ16 436 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 COMMD5Q9GZQ3 224 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 VSIRQ9H7M9 311 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 FKBP11Q9NYL4 201 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 ZNF257Q9Y2Q1 563 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 HILPDAQ9Y5L2 63 aa10.44□□□□□ -0.74
TRIM40-206ENST00000376724 S100PP25815 95 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 PAX6P26367 422 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 SSTP61278 116 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 RAB11AP62491 216 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 PRCDQ00LT1 54 aa10.43□□□□□ -0.74
TRIM40-206ENST00000376724 GUCA2BQ16661 112 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms