RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 DHFRP00374 187 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 C8orf88P0DMB2 117 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 HLA-GP17693 338 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 OR2B8PP59922 312 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 UBE2UQ5VVX9 321 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 OR13F1Q8NGS4 319 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 SECTM1Q8WVN6 248 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 GGTLC1Q9BX51 225 aa11.15□□□□□ -0.62
CLCN6-204ENST00000376491 RRP15Q9Y3B9 282 aaKnown RBP11.15□□□□□ -0.62
CLCN6-204ENST00000376491 LOC102724200A0A096LPH7 203 aaPredicted RBP11.14□□□□□ -0.63
CLCN6-204ENST00000376491 TRBV7-1A0A0A6YYK4 115 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 IGLC7A0M8Q6 106 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 SCGNO76038 276 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 DEFA4P12838 97 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 FCGR2CP31995 323 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 SFXN4Q6P4A7 337 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 TPRA1Q86W33 373 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 SPAG16Q8N0X2 631 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 BEST4Q8NFU0 473 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 OR5H6Q8NGV6 325 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 OR4A5Q8NH83 315 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 ZNF502Q8TBZ5 544 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 RHBDL2Q9NX52 303 aa11.14□□□□□ -0.63
CLCN6-204ENST00000376491 IGHV3-35A0A0C4DH35 117 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 SULT1C2O00338 296 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 UPK2O00526 184 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 GPR183P32249 361 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 HSPA13P48723 471 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 GABARAPL2P60520 117 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 EWSR1Q01844 656 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLCN6-204ENST00000376491 MSMO1Q15800 293 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 ZNF585BQ52M93 769 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 SPARTQ8N0X7 666 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 LINC00476Q8WZB0 136 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 SLC25A38Q96DW6 304 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 CXorf58Q96LI9 332 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 HRASLSQ9HDD0 168 aa11.13□□□□□ -0.63
CLCN6-204ENST00000376491 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 TRAV25A0A0B4J276 109 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 RBFOX2O43251 390 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLCN6-204ENST00000376491 MRPS14O60783 128 aaKnown RBP11.12□□□□□ -0.63
CLCN6-204ENST00000376491 PPYP01298 95 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 FCER2P06734 321 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 CLEC2LP0C7M8 214 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 PSMB9P28065 219 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 ANKRD55Q3KP44 614 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 HOGA1Q86XE5 327 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 MARC2Q969Z3 335 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 VCX3BQ9H321 246 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 RNF167Q9H6Y7 350 aa11.12□□□□□ -0.63
CLCN6-204ENST00000376491 MRPL27Q9P0M9 148 aaKnown RBP11.12□□□□□ -0.63
CLCN6-204ENST00000376491 HPRT1P00492 218 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 PTBP1P26599 531 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLCN6-204ENST00000376491 SDC2P34741 201 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 ELLP55199 621 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-204ENST00000376491 TAS2R31P59538 309 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 ARPC4P59998 168 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 MXD1Q05195 221 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 PLET1Q6UQ28 207 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 OR10W1Q8NGF6 305 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 OR1L6Q8NGR2 347 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 ZNF436Q9C0F3 470 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-204ENST00000376491 SLC5A7Q9GZV3 580 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 RAB26Q9ULW5 256 aa11.11□□□□□ -0.63
CLCN6-204ENST00000376491 A0A0J9YWU9 116 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 TGOLN2O43493 480 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 NQO2P16083 231 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 FXYD4P59646 89 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 PMS2P11Q13670 270 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 ZNF818PQ6ZRF7 136 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 RBPMS2Q6ZRY4 209 aaKnown RBP11.1□□□□□ -0.63
CLCN6-204ENST00000376491 WFDC3Q8IUB2 231 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 SRSF8Q9BRL6 282 aaKnown RBP11.1□□□□□ -0.63
CLCN6-204ENST00000376491 AIFM2Q9BRQ8 373 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 COMMD5Q9GZQ3 224 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 UBQLN2Q9UHD9 624 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 SSR3Q9UNL2 185 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 UFC1Q9Y3C8 167 aa11.1□□□□□ -0.63
CLCN6-204ENST00000376491 S1PR2O95136 353 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 RPA2P15927 270 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 CATR1Q13166 79 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 IDNKQ5T6J7 187 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 OR2C3Q8N628 320 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 VN1R17PQ8TDU5 208 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 GIMAP1Q8WWP7 306 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 TMEM190Q8WZ59 177 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
CLCN6-204ENST00000376491 C5orf66Q9H5L9 145 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 AUNIPQ9H7T9 357 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 PLEKHA2Q9HB19 425 aa11.09□□□□□ -0.63
CLCN6-204ENST00000376491 CXorf65A6NEN9 183 aa11.08□□□□□ -0.64
CLCN6-204ENST00000376491 OR2T8A6NH00 312 aa11.08□□□□□ -0.64
CLCN6-204ENST00000376491 TSPAN4O14817 238 aa11.08□□□□□ -0.64
CLCN6-204ENST00000376491 LY6G6CO95867 125 aa11.08□□□□□ -0.64
CLCN6-204ENST00000376491 MFAP2P55001 183 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms