RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TBL2Q9Y4P3 447 aaKnown RBP12.28□□□□□ -0.44
COL9A2-202ENST00000372748 PMCHP20382 165 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 OPRK1P41145 380 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 PCP4P48539 62 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 RAB7AP51149 207 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 TCL1AP56279 114 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 FOXF2Q12947 444 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 GCNT2Q8N0V5 402 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 C11orf42Q8N5U0 333 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 RCHY1Q96PM5 261 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 OBP2BQ9NPH6 170 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 SPRR3Q9UBC9 169 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 NAT8BQ9UHF3 227 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 TRAV3A0A0B4J244 114 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 ESDP10768 282 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 GCHFRP30047 84 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 ZNF718Q3SXZ3 478 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 CBY1Q9Y3M2 126 aa12.27□□□□□ -0.45
COL9A2-202ENST00000372748 TRAV34A0A0B4J273 112 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 KLRC4-KLRK1H3BQV0 150 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 LYZL6O75951 148 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 LINC00614P0C842 121 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 AMTP48728 403 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 HTD2P86397 168 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 FXYD3Q14802 87 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 RPEL1Q2QD12 228 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 TMEM249Q2WGJ8 235 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 ACTL6BO94805 426 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 GPX1P07203 203 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 COL5A1-AS1Q5SY13 56 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 DOLPP1Q86YN1 238 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 OR4A16Q8NH70 328 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 SLC25A40Q8TBP6 338 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 DNAJC4Q9NNZ3 241 aa12.26□□□□□ -0.45
COL9A2-202ENST00000372748 KLF13Q9Y2Y9 288 aaPredicted RBP12.26□□□□□ -0.45
COL9A2-202ENST00000372748 SPENQ96T58 3664 aaKnown RBP12.25□□□□□ -0.45
COL9A2-202ENST00000372748 C21orf140B9A014 251 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 SMPD2O60906 423 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 PROP1O75360 226 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 TNFSF15O95150 251 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 CHRNB4P30926 498 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 EDDM3AQ14507 147 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 EFNB3Q15768 340 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 TBC1D28Q2M2D7 210 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 SPATA45Q537H7 98 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 ASPHD1Q5U4P2 390 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 Q8N976 141 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 OR4P4Q8NGL7 312 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 Q8TCH9 128 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 EAF1Q96JC9 268 aaPredicted RBP12.25□□□□□ -0.45
COL9A2-202ENST00000372748 RNASE7Q9H1E1 156 aaKnown RBP12.25□□□□□ -0.45
COL9A2-202ENST00000372748 ZNF586Q9NXT0 402 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 A8MXE2 369 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 CGAP01215 116 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 MRPL52Q86TS9 123 aaKnown RBP12.25□□□□□ -0.45
COL9A2-202ENST00000372748 MDS2Q8NDY4 140 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 NANOS1Q8WY41 292 aaKnown RBP12.25□□□□□ -0.45
COL9A2-202ENST00000372748 C1orf159Q96HA4 380 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 WNT10AQ9GZT5 417 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 NRN1Q9NPD7 142 aa12.25□□□□□ -0.45
COL9A2-202ENST00000372748 TRGV5A0A0B4J1U4 118 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 ATOH7Q8N100 152 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 STPG4Q8N801 248 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 UHRF2Q96PU4 802 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 HSD17B10Q99714 261 aaKnown RBP12.24□□□□□ -0.45
COL9A2-202ENST00000372748 V9GYV3 84 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 CFAP47Q6ZTR5 3102 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 GFRA3O60609 400 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 MPDU1O75352 247 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 WISP2O76076 250 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 CD59P13987 128 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 SUMO1P63165 101 aaKnown RBP12.24□□□□□ -0.45
COL9A2-202ENST00000372748 Q0VG73 95 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 SLC35E4Q6ICL7 350 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 Q6ZVH6 145 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 FAM19A2Q8N3H0 131 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 HCFC1P51610 2035 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 MPV17P39210 176 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 ARG2P78540 354 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 STPG3Q8N7X2 389 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 STARD4Q96DR4 205 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 SLC35E1Q96K37 410 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 RNF2Q99496 336 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 TXN2Q99757 166 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 TXNDC17Q9BRA2 123 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 ZFP30Q9Y2G7 519 aa12.24□□□□□ -0.45
COL9A2-202ENST00000372748 ZFHX4Q86UP3 3567 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 CD46P15529 392 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 CRYBB3P26998 211 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 DUTP33316 252 aaKnown RBP12.23□□□□□ -0.45
COL9A2-202ENST00000372748 GPR12P47775 334 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 RPL39P5Q59GN2 51 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 CENPWQ5EE01 88 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 ALKBH2Q6NS38 261 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 MRPL54Q6P161 138 aaKnown RBP12.23□□□□□ -0.45
COL9A2-202ENST00000372748 PQLC2Q6ZP29 291 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 OR4B1Q8NGF8 309 aa12.23□□□□□ -0.45
COL9A2-202ENST00000372748 TUBG2Q9NRH3 451 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms