RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TMEM167AQ8TBQ9 72 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 ZNF414Q96IQ9 312 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 DERL3Q96Q80 235 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 DCUN1D5Q9BTE7 237 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 CABLES2Q9BTV7 478 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 RHPN1-AS1Q9BWJ2 59 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 KRTAP9-2Q9BYQ4 174 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 TBC1D24Q9ULP9 559 aa10.44□□□□□ -0.74
VAMP4-202ENST00000367740 IGHV7-4-1A0A0J9YVY3 117 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 C15orf62A8K5M9 175 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 FCGR3BO75015 233 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 MAS1LP35410 378 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 TRPT1Q86TN4 253 aaKnown RBP10.43□□□□□ -0.74
VAMP4-202ENST00000367740 STHQ8IWL8 128 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 PUSL1Q8N0Z8 303 aaKnown RBP10.43□□□□□ -0.74
VAMP4-202ENST00000367740 FAM24BQ8N5W8 94 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 ZFP41Q8N8Y5 198 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 CSNK1G2-AS1Q8NCQ2 148 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 BSCL2Q96G97 398 aaPredicted RBP10.43□□□□□ -0.74
VAMP4-202ENST00000367740 FAM210BQ96KR6 192 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 MRPS18AQ9NVS2 196 aaKnown RBP10.43□□□□□ -0.74
VAMP4-202ENST00000367740 CLEC5AQ9NY25 188 aa10.43□□□□□ -0.74
VAMP4-202ENST00000367740 TRBV6-7A0A0A0MS04 114 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 IGHV3-49A0A0A0MS15 119 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 FABP7O15540 132 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 CELP19835 753 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 NPY1RP25929 384 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 QRFPP83859 136 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 OR2B11Q5JQS5 317 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 OR10J5Q8NHC4 309 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 VSTM2AQ8TAG5 236 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 VN1R17PQ8TDU5 208 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 LPAR5Q9H1C0 372 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 TMEM14BQ9NUH8 114 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 BABAM2Q9NXR7 383 aa10.42□□□□□ -0.74
VAMP4-202ENST00000367740 NBDYA0A0U1RRE5 68 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 FOXI3A8MTJ6 420 aaPredicted RBP10.41□□□□□ -0.74
VAMP4-202ENST00000367740 TMEM14DPA8MWL7 114 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 F8W735 103 aaPredicted RBP10.41□□□□□ -0.74
VAMP4-202ENST00000367740 DFFBO76075 338 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 SPP1P10451 314 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 SPSB3Q6PJ21 355 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 TMPRSS11AQ6ZMR5 421 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 KCTD9Q7L273 389 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 TMEM116Q8NCL8 245 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 GIMAP1Q8WWP7 306 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 CMSS1Q9BQ75 279 aaKnown RBP10.41□□□□□ -0.74
VAMP4-202ENST00000367740 RNF167Q9H6Y7 350 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 FGF20Q9NP95 211 aaPredicted RBP10.41□□□□□ -0.74
VAMP4-202ENST00000367740 ZNF446Q9NWS9 450 aa10.41□□□□□ -0.74
VAMP4-202ENST00000367740 SMPD3Q9NY59 655 aaPredicted RBP10.41□□□□□ -0.74
VAMP4-202ENST00000367740 RBM7Q9Y580 266 aaKnown RBP10.41□□□□□ -0.74
VAMP4-202ENST00000367740 IGLC7A0M8Q6 106 aa10.4□□□□□ -0.74
VAMP4-202ENST00000367740 SAC3D1A6NKF1 404 aa10.4□□□□□ -0.74
VAMP4-202ENST00000367740 GYS2P54840 703 aa10.4□□□□□ -0.74
VAMP4-202ENST00000367740 RPL30P62888 115 aaKnown RBP10.4□□□□□ -0.74
VAMP4-202ENST00000367740 ZIK1Q3SY52 487 aaPredicted RBP10.4□□□□□ -0.74
VAMP4-202ENST00000367740 HSP90B2PQ58FF3 399 aa10.4□□□□□ -0.74
VAMP4-202ENST00000367740 LYPD1Q8N2G4 141 aa10.4□□□□□ -0.74
VAMP4-202ENST00000367740 CMTM3Q96MX0 182 aa10.4□□□□□ -0.74
VAMP4-202ENST00000367740 THYN1Q9P016 225 aa10.4□□□□□ -0.74
VAMP4-202ENST00000367740 HSF4Q9ULV5 492 aa10.4□□□□□ -0.74
VAMP4-202ENST00000367740 IGHV3OR16-13A0A075B7E8 117 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 IGHV3-74A0A0B4J1X5 117 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 KRTAP9-6A0A140TA67 174 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 RAB27BO00194 218 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 ALPLP05186 524 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 CRHBPP24387 322 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 TMEM50BP56557 158 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 FAM3BP58499 235 aaPredicted RBP10.39□□□□□ -0.75
VAMP4-202ENST00000367740 OR2B8PP59922 312 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 RPL8P62917 257 aaKnown RBP10.39□□□□□ -0.75
VAMP4-202ENST00000367740 C1orf100Q5SVJ3 147 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 TCF24Q7RTU0 167 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 FAM89BQ8N5H3 189 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 RHOXF1Q8NHV9 184 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 ARHGAP5-AS1Q96IT6 56 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 Q96MT0 163 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 PECRQ9BY49 303 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 YTHDF1Q9BYJ9 559 aaKnown RBP10.39□□□□□ -0.75
VAMP4-202ENST00000367740 MS4A6AQ9H2W1 248 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 PGPEP1Q9NXJ5 209 aa10.39□□□□□ -0.75
VAMP4-202ENST00000367740 MRPS7Q9Y2R9 242 aaKnown RBP10.39□□□□□ -0.75
VAMP4-202ENST00000367740 IGHV3-21A0A0B4J1V1 117 aa10.38□□□□□ -0.75
VAMP4-202ENST00000367740 DIRAS3O95661 229 aa10.38□□□□□ -0.75
VAMP4-202ENST00000367740 HLA-GP17693 338 aa10.38□□□□□ -0.75
VAMP4-202ENST00000367740 PAFAH1B2P68402 229 aa10.38□□□□□ -0.75
VAMP4-202ENST00000367740 ZNF66Q6ZN08 573 aa10.38□□□□□ -0.75
VAMP4-202ENST00000367740 OR10C1Q96KK4 312 aa10.38□□□□□ -0.75
VAMP4-202ENST00000367740 PRELID3BQ9Y3B1 194 aa10.38□□□□□ -0.75
VAMP4-202ENST00000367740 AP4S1Q9Y587 144 aa10.38□□□□□ -0.75
VAMP4-202ENST00000367740 PNMA8CA0A1B0GUJ8 204 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 NUPL2O15504 423 aaKnown RBP10.37□□□□□ -0.75
VAMP4-202ENST00000367740 XGP55808 180 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 PLA2G7Q13093 441 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 TTC23Q5W5X9 447 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 H1FOOQ8IZA3 346 aaPredicted RBP10.37□□□□□ -0.75
VAMP4-202ENST00000367740 OR4S2Q8NH73 311 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 ZNRF2Q8NHG8 242 aa10.37□□□□□ -0.75
VAMP4-202ENST00000367740 APH1BQ8WW43 257 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms