RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ZNF702PQ9H963 129 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 TMEM14BQ9NUH8 114 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 COA4Q9NYJ1 87 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 PRNDQ9UKY0 176 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 NSG2Q9Y328 171 aa9.81□□□□□ -0.84
NIF3L1-201ENST00000359683 LINC01548A6NM66 108 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 C15orf61A6NNL5 157 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 IFNA21P01568 189 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 COMPP49747 757 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 FXYD3Q14802 87 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 C2orf68Q2NKX9 166 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 Q6ZSV7 163 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 ZNF429Q86V71 674 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 OR4A16Q8NH70 328 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 FKBP11Q9NYL4 201 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 CACNG5Q9UF02 275 aa9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 FOXA2Q9Y261 457 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-201ENST00000359683 TEX50A0A1B0GTY4 177 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 MPTX1A8MV57 137 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 PITX3O75364 302 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 ACTL6BO94805 426 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 SULT1A3P0DMM9 295 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 SULT1A4P0DMN0 295 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 EGR2P11161 476 aaPredicted RBP9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 MYOD1P15172 320 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 SMCO1Q147U7 214 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 TNXAQ16473 311 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 C9orf152Q5JTZ5 239 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 C19orf24Q9BVV8 132 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 C16orf95Q9H693 158 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 ZNF257Q9Y2Q1 563 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 OR51B2Q9Y5P1 312 aa9.79□□□□□ -0.84
NIF3L1-201ENST00000359683 E7EUB6 86 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 KCNAB3O43448 404 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 SSNA1O43805 119 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 NDUFA7O95182 113 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 CNIH1O95406 144 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 OR2B8PP59922 312 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 HSPE1P61604 102 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 GNB1P62873 340 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 NDPQ00604 133 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 SLC35E3Q7Z769 313 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 OR1L8Q8NGR8 309 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 OR5B3Q8NH48 314 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 SRSF12Q8WXF0 261 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 ARPC1AQ92747 370 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 OR10C1Q96KK4 312 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 SPIN2AQ99865 258 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 SPIN2BQ9BPZ2 258 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 QTRT1Q9BXR0 403 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 COMMD5Q9GZQ3 224 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 TET2Q6N021 2002 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 A0A1B0GW64 132 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 CGB1A6NKQ9 187 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 CCSO14618 274 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 ST8SIA3O43173 380 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 IGF1P05019 195 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 RPL27AP46776 148 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 CRIP2P52943 208 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 PDLIM3Q53GG5 364 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 C10orf55Q5SWW7 151 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 THOC7Q6I9Y2 204 aaKnown RBP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 OR52E5Q8NH55 327 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 SGMS2Q8NHU3 365 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 TAF15Q92804 592 aaKnown RBP eCLIP9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 NDUFA4L2Q9NRX3 87 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 CACFD1Q9UGQ2 172 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 ZNF580Q9UK33 172 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 FBXO7Q9Y3I1 522 aa9.78□□□□□ -0.84
NIF3L1-201ENST00000359683 C13orf42A0A1B0GVH6 325 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 MSGN1A6NI15 193 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 ATP6V0E1O15342 81 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 RBMXL2O75526 392 aaKnown RBP9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 OPN1MWP04001 364 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 OPN1MW2P0DN77 364 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 OPN1MW3P0DN78 364 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 HKR1P10072 659 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 IAH1Q2TAA2 248 aaPredicted RBP9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 GSG1LQ6UXU4 331 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 OR5M8Q8NGP6 311 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 C2orf50Q96LR7 162 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 MED28Q9H204 178 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 SERTAD4Q9NUC0 356 aa9.77□□□□□ -0.85
NIF3L1-201ENST00000359683 C5orf51A6NDU8 294 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 AP4M1O00189 453 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 GOSR2O14653 212 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 TRAPPC2P0DI81 140 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 TRAPPC2BP0DI82 140 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 SPCS3P61009 180 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 RRAS2P62070 204 aaPredicted RBP9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 ID3Q02535 119 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 IL15RAQ13261 267 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 FCN2Q15485 313 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 ZBTB8BQ8NAP8 495 aaPredicted RBP9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 OR4D5Q8NGN0 318 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 OR1S1Q8NH92 325 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 OR2T6Q8NHC8 308 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 GRPEL2Q8TAA5 225 aa9.76□□□□□ -0.85
NIF3L1-201ENST00000359683 SRSF8Q9BRL6 282 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms