RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SPATA3Q8NHX4 192 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 WFDC12Q8WWY7 111 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 LHX4Q969G2 390 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 MGST2Q99735 147 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 POTEKPQ9BYX7 375 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 CLCF1Q9UBD9 225 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 MRPS18CQ9Y3D5 142 aaKnown RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 GSTP1P09211 210 aaKnown RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 CEACAM6P40199 344 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 ZNF561Q8N587 486 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 Q8NFD4 153 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 OR5R1Q8NH85 324 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 OR1F12Q8NHA8 337 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 C8orf46Q8TAG6 207 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 C19orf12Q9NSK7 152 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 SERTAD4Q9NUC0 356 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 ZNF580Q9UK33 172 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 A0A0D9SG52 128 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 A8MXE2 369 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 SYNGR4O95473 234 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 ZNF705DP0CH99 300 aaPredicted RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 ZNF705BP0CI00 300 aaPredicted RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 CCL11P51671 97 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 SLC25A53Q5H9E4 307 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 SLC25A40Q8TBP6 338 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 GTSF1Q8WW33 167 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 GINS3Q9BRX5 216 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 PITHD1Q9GZP4 211 aaPredicted RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 RIMS4Q9H426 269 aaPredicted RBP4.47□□□□□ -1.69
CD47-201ENST00000355354 MLXQ9UH92 298 aa4.47□□□□□ -1.69
CD47-201ENST00000355354 LRP1BQ9NZR2 4599 aa4.46□□□□□ -1.69
CD47-201ENST00000355354 ALMS1Q8TCU4 4167 aa4.46□□□□□ -1.69
CD47-201ENST00000355354 RBFOX3A6NFN3 312 aa4.46□□□□□ -1.69
CD47-201ENST00000355354 RPL15P61313 204 aaKnown RBP4.46□□□□□ -1.69
CD47-201ENST00000355354 OR2F1Q13607 317 aa4.46□□□□□ -1.69
CD47-201ENST00000355354 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.46□□□□□ -1.69
CD47-201ENST00000355354 ZNF100Q8IYN0 542 aa4.46□□□□□ -1.69
CD47-201ENST00000355354 OSR2Q8N2R0 312 aa4.46□□□□□ -1.69
CD47-201ENST00000355354 TMEM54Q969K7 222 aa4.46□□□□□ -1.69
CD47-201ENST00000355354 BCO1Q9HAY6 547 aa4.46□□□□□ -1.69
CD47-201ENST00000355354 CCL25O15444 150 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 DVL1P1P54792 670 aaPredicted RBP4.46□□□□□ -1.7
CD47-201ENST00000355354 HLA-DRB3P79483 266 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 PNRC1Q12796 327 aaPredicted RBP4.46□□□□□ -1.7
CD47-201ENST00000355354 FAM120AOSQ5T036 256 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 LPCAT3Q6P1A2 487 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 WDR82Q6UXN9 313 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 OR5H2Q8NGV7 314 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 MDFIQ99750 246 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 ANGPTL4Q9BY76 406 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 TTTY12Q9BZ98 90 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 MS4A5Q9H3V2 200 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 IGHV3-49A0A0A0MS15 119 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 ZNHIT3Q15649 155 aaPredicted RBP4.46□□□□□ -1.7
CD47-201ENST00000355354 MIR17HGQ75NE6 70 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 KLF14Q8TD94 323 aaPredicted RBP4.46□□□□□ -1.7
CD47-201ENST00000355354 GMPPAQ96IJ6 420 aaPredicted RBP4.46□□□□□ -1.7
CD47-201ENST00000355354 NMES1Q9C002 83 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 COMMD4Q9H0A8 199 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 MMP26Q9NRE1 261 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 A0A1W2PQD3 144 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 ST8SIA3O43173 380 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 CYB5R3P00387 301 aaPredicted RBP4.46□□□□□ -1.7
CD47-201ENST00000355354 S100PP25815 95 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 FOLR3P41439 243 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 CLRN1P58418 232 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 RPL8P62917 257 aaKnown RBP4.46□□□□□ -1.7
CD47-201ENST00000355354 SRSF2Q01130 221 aaKnown RBP4.46□□□□□ -1.7
CD47-201ENST00000355354 RAB35Q15286 201 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 C10orf128Q5T292 105 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 TREML4Q6UXN2 200 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 TMEM144Q7Z5S9 345 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 LRRC75A-AS1Q8N1F1 130 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 ETV7Q9Y603 341 aa4.46□□□□□ -1.7
CD47-201ENST00000355354 C9J4A7 227 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 F8W735 103 aaPredicted RBP4.45□□□□□ -1.7
CD47-201ENST00000355354 SAP30O75446 220 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 MSR1P21757 451 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 MAPK3P27361 379 aaPredicted RBP4.45□□□□□ -1.7
CD47-201ENST00000355354 NIT1Q86X76 327 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 OR4F17Q8NGA8 305 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 DTD1Q8TEA8 209 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 C22orf15Q8WYQ4 148 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 OR4F4Q96R69 305 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 C1QTNF5Q9BXJ0 243 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 ZNF442Q9H7R0 627 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 RPUSD1Q9UJJ7 312 aaKnown RBP4.45□□□□□ -1.7
CD47-201ENST00000355354 LPAP08519 4548 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 A0A0U1RQV5 110 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 SERF1AO75920 110 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 DAP3P51398 398 aaKnown RBP4.45□□□□□ -1.7
CD47-201ENST00000355354 RIPPLY2Q5TAB7 128 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 FAM185AQ8N0U4 392 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 OR14L1PQ8NHC6 308 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 FAM167A-AS1Q96KT0 104 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 SDF2L1Q9HCN8 221 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 MBNL3Q9NUK0 354 aaKnown RBP4.45□□□□□ -1.7
CD47-201ENST00000355354 RPL36A-HNRNPH2H7BZ11 118 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 H7C2Y5 167 aa4.45□□□□□ -1.7
CD47-201ENST00000355354 OR2C1O95371 312 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms