RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 ZNF645Q8N7E2 425 aa10.14□□□□□ -0.79
TRAF3-201ENST00000347662 SAP25Q8TEE9 199 aa10.14□□□□□ -0.79
TRAF3-201ENST00000347662 DNAJC4Q9NNZ3 241 aa10.14□□□□□ -0.79
TRAF3-201ENST00000347662 J3QT63 122 aa10.14□□□□□ -0.79
TRAF3-201ENST00000347662 LRTM2Q8N967 370 aa10.14□□□□□ -0.79
TRAF3-201ENST00000347662 PEMTQ9UBM1 199 aa10.14□□□□□ -0.79
TRAF3-201ENST00000347662 TRAV2A0A0B4J234 112 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 LINC00614P0C842 121 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 RPL36A-HNRNPH2H7BZ11 118 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 HBDP02042 147 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 FAM71F2Q6NXP2 309 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 RIMKLAQ8IXN7 391 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 MMD2Q8IY49 270 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 WFIKKN1Q96NZ8 548 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 ANAPC13Q9BS18 74 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 TP53BP1Q12888 1972 aaPredicted RBP10.13□□□□□ -0.79
TRAF3-201ENST00000347662 VDAC2P45880 294 aaPredicted RBP10.13□□□□□ -0.79
TRAF3-201ENST00000347662 VAX1Q5SQQ9 334 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 FBXW9Q5XUX1 488 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 ZGRF1Q86YA3 2104 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 ST6GAL2Q96JF0 529 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 SH3BGRL3Q9H299 93 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 VCX2Q9H322 139 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 IGF2P01344 180 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 MMP16P51512 607 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 MIC13Q5XKP0 118 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 LURAP1LQ8IV03 231 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 RNF182Q8N6D2 247 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 NEU3Q9UQ49 428 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 TCRBV5S2A0A599 114 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 TCF23Q7RTU1 214 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 TMEM45BQ96B21 275 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 RCC1P18754 421 aaPredicted RBP10.13□□□□□ -0.79
TRAF3-201ENST00000347662 ZAR1Q86SH2 424 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 CYB561D1Q8N8Q1 229 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 TMEM52Q8NDY8 209 aa10.13□□□□□ -0.79
TRAF3-201ENST00000347662 PNKDQ8N490 385 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 CHCHD5Q9BSY4 110 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 ANAPC10Q9UM13 185 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 TCRBV4S1A1TA0A5B7 111 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 FOXS1O43638 330 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 FOXH1O75593 365 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 ORAOV1Q8WV07 137 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 TTTY12Q9BZ98 90 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 CHST5Q9GZS9 411 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 NPIPB11E5RHQ5 1161 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 PLPP2O43688 288 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 CLPSP04118 112 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 CLDND2Q8NHS1 167 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 IL20Q9NYY1 176 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 CD7P09564 240 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 C9orf40Q8IXQ3 194 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 VWC2LB2RUY7 222 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 OR51G1Q8NGK1 321 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 NEUROG1Q92886 237 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 IDI2-AS1Q9NZ38 188 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 HLA-DQA1P01909 254 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 ATP6V0CP27449 155 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 WDR34Q96EX3 536 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 RNF115Q9Y4L5 304 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 ANKRD36A6QL64 1941 aa10.12□□□□□ -0.79
TRAF3-201ENST00000347662 ANK1P16157 1881 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 OGG1O15527 345 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 UCP2P55851 309 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 TMEM155Q4W5P6 130 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 WFDC12Q8WWY7 111 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 QTRT1Q9BXR0 403 aaKnown RBP10.11□□□□□ -0.79
TRAF3-201ENST00000347662 WDR54Q9H977 334 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 LRRC37AA6NMS7 1700 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 DERL1Q9BUN8 251 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 DSPPQ9NZW4 1301 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 LILRA1O75019 489 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 CRYBB3P26998 211 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 KIAA2026Q5HYC2 2103 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 ELF5Q9UKW6 265 aaPredicted RBP10.11□□□□□ -0.79
TRAF3-201ENST00000347662 A0A1B0GV90 55 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 IGHV3OR16-8A0A075B7F1 116 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 ICAM4Q14773 271 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 ST6GALNAC6Q969X2 333 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 TRGC2P03986 189 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
TRAF3-201ENST00000347662 PEF1Q9UBV8 284 aaKnown RBP10.11□□□□□ -0.79
TRAF3-201ENST00000347662 DTX4Q9Y2E6 619 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 SBF1O95248 1867 aa10.11□□□□□ -0.79
TRAF3-201ENST00000347662 NAT1P18440 290 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 RIPPLY3P57055 190 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 CLEC19AQ6UXS0 136 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 LINC00305Q7Z4B0 112 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 NDUFS5O43920 106 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 MOSP00540 346 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 RUNX1Q01196 453 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 KBTBD11-OT1A0A1B0GTJ5 212 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 F12P00748 615 aaPredicted RBP10.1□□□□□ -0.79
TRAF3-201ENST00000347662 SMIM6P0DI80 62 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 PLAC1Q9HBJ0 212 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 RBBP6Q7Z6E9 1792 aaKnown RBP10.1□□□□□ -0.79
TRAF3-201ENST00000347662 CDC42EP2O14613 210 aa10.1□□□□□ -0.79
TRAF3-201ENST00000347662 MT-ND6P03923 174 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms