RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PMS2P11Q13670 270 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 ZNF788Q6ZQV5 615 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 OR52E5Q8NH55 327 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 PXMP4Q9Y6I8 212 aa12.23□□□□□ -0.45
VIPAS39-202ENST00000343765 DSCAML1Q8TD84 2053 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 DPRXA6NFQ7 191 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 IGKV1-16P04430 117 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 THBS3P49746 956 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 GFI1BQ5VTD9 330 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 ZCCHC14Q8WYQ9 949 aaKnown RBP12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 NEIL1Q96FI4 390 aaPredicted RBP12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 GGTLC1Q9BX51 225 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 RAB9BQ9NP90 201 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 NPPCP23582 126 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 GFRALQ6UXV0 394 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 ZNF439Q8NDP4 499 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 FRZBQ92765 325 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 FAM122AQ96E09 287 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 ELOVL1Q9BW60 279 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 TMEM242Q9NWH2 141 aa12.22□□□□□ -0.45
VIPAS39-202ENST00000343765 TANC2Q9HCD6 1990 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 CHD8Q9HCK8 2581 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 PTPRQQ9UMZ3 2332 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 IFITM10A6NMD0 228 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 PRSS46E5RG02 174 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 TRGC1P0CF51 173 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 HOXA5P20719 270 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 NPY1RP25929 384 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 ADIPOQQ15848 244 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 PRR30Q53SZ7 412 aaPredicted RBP12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 SLC24A4Q8NFF2 622 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 TCEAL7Q9BRU2 100 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 GAB2Q9UQC2 676 aa12.21□□□□□ -0.45
VIPAS39-202ENST00000343765 CA2P00918 260 aa12.21□□□□□ -0.46
VIPAS39-202ENST00000343765 ARL14EPLP0DKL9 152 aa12.21□□□□□ -0.46
VIPAS39-202ENST00000343765 CCL3L1P16619 93 aa12.21□□□□□ -0.46
VIPAS39-202ENST00000343765 ARSJQ5FYB0 599 aaPredicted RBP12.21□□□□□ -0.46
VIPAS39-202ENST00000343765 ABHD5Q8WTS1 349 aa12.21□□□□□ -0.46
VIPAS39-202ENST00000343765 OR51B2Q9Y5P1 312 aa12.21□□□□□ -0.46
VIPAS39-202ENST00000343765 TNCP24821 2201 aa12.21□□□□□ -0.46
VIPAS39-202ENST00000343765 ZNF729A6NN14 1252 aaPredicted RBP12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 SEC14L6B5MCN3 397 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 H7BYZ3 331 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 NUBP1P53384 320 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 NUP37Q8NFH4 326 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 DIRC2Q96SL1 478 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 DERL1Q9BUN8 251 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 ITGB1BP1O14713 200 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 OPRK1P41145 380 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 HSPE1P61604 102 aaKnown RBP12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 OR13D1Q8NGV5 346 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 CCL17Q92583 94 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 C1orf159Q96HA4 380 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 SLC35D1Q9NTN3 355 aa12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 SLC25A10Q9UBX3 287 aaPredicted RBP12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 RPUSD1Q9UJJ7 312 aaKnown RBP12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 FOXA2Q9Y261 457 aaPredicted RBP12.2□□□□□ -0.46
VIPAS39-202ENST00000343765 NKX6-3A6NJ46 265 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 MPDU1O75352 247 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 THBDP07204 575 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 CT45A6P0DMU7 189 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 CT45A5P0DMU8 189 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 CT45A7P0DMV0 189 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 GALR1P47211 349 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 REG1BP48304 166 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 TDGF1P3P51864 188 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 RPL31P62899 125 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 Q8NA96 180 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 H1FXQ92522 213 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 TRGV8A0A0C4DH27 118 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 hADV38S2A0JD32 116 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 SRRM4A7MD48 611 aaKnown RBP12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 C17orf100A8MU93 164 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 NDUFB4O95168 129 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 LY86O95711 162 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 TNFRSF1AP19438 455 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 CDX1P47902 265 aaPredicted RBP12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 B2MP61769 119 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 GNB1P62873 340 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 SPATA31B1PQ5VZV4 182 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 NCOR1P1Q9H4R4 102 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 SAP30LQ9HAJ7 183 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 ABCA4P78363 2273 aa12.19□□□□□ -0.46
VIPAS39-202ENST00000343765 A0A1W2PPQ1 181 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 PGPEP1LA6NFU8 196 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 HRASP01112 189 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 IL6RP08887 468 aaPredicted RBP12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 CHRNA7P36544 502 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 TEX36Q5VZQ5 186 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 MOB3BQ86TA1 216 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 ADTRPQ96IZ2 230 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 OR5B12Q96R08 314 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 GGACTQ9BVM4 153 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 NPVFQ9HCQ7 196 aa12.18□□□□□ -0.46
VIPAS39-202ENST00000343765 NCOR2Q9Y618 2525 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms