RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SNRPEP62304 92 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TREML4Q6UXN2 200 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 C1QL4Q86Z23 238 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 LYG1Q8N1E2 194 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 NEUROG1Q92886 237 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 RHOVQ96L33 236 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 WFIKKN1Q96NZ8 548 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 SRRM4A7MD48 611 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TMEM178BH3BS89 294 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 CD1BP29016 333 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 MGST2Q99735 147 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 SSX3Q99909 188 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 MS4A5Q9H3V2 200 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 LSM4Q9Y4Z0 139 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 LINC00312Q9Y6C7 94 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 PKDREJQ9NTG1 2253 aa10.61□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TGIF2-C20orf24A0A0A6YYL0 155 aa10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 UBE2CO00762 179 aa10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 MBP02144 154 aa10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 IGKV1-16P04430 117 aa10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 NPPCP23582 126 aa10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 MEF2BQ02080 365 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 RAB9BQ9NP90 201 aa10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 SIRT7Q9NRC8 400 aa10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 RELNP78509 3460 aa10.6□□□□□ -0.71
CDK5RAP1-201ENST00000339269 ZNF98A6NK75 572 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 E7EQL1 145 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TMPRSS2O15393 492 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 LY86O95711 162 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 IFNA10P01566 189 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 IFNA4P05014 189 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 CCL3L1P16619 93 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 RND2P52198 227 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 ARSJQ5FYB0 599 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 LYPD2Q6UXB3 125 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 ZNF833PQ6ZTB9 187 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 GGACTQ9BVM4 153 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 GGTLC1Q9BX51 225 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 ACTR3CQ9C0K3 210 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 HEYLQ9NQ87 328 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 CTSZQ9UBR2 303 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 MYO18BQ8IUG5 2567 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TRAV38-1A0A0B4J264 116 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 CXorf65A6NEN9 183 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 IFNA1P01562 189 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 IRF2P14316 349 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TNFRSF1AP19438 455 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 AKR1D1P51857 326 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 HSPE1P61604 102 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TMEM249Q2WGJ8 235 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TMEM30BQ3MIR4 351 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TMEM200BQ69YZ2 307 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 ADTRPQ96IZ2 230 aa10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 SLC25A10Q9UBX3 287 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP1-201ENST00000339269 TNCP24821 2201 aa10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 hADV38S2A0JD32 116 aa10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 B4DEV8 164 aa10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 NDUFS6O75380 124 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 NDUFB7P17568 137 aa10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 DLX6P56179 175 aa10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 PNRC1Q12796 327 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 CYP2G1PQ6ZSU1 146 aa10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 SAP30LQ9HAJ7 183 aa10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 URGCP-MRPS24S4R325 110 aa10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 FASNP49327 2511 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 GCN1Q92616 2671 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP1-201ENST00000339269 NKX6-3A6NJ46 265 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 TMEM250H0YL14 139 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 UPK2O00526 184 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 KBTBD11O94819 623 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 OPRK1P41145 380 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 CDC34P49427 236 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 RPL31P62899 125 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 MEF2CQ06413 473 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 ACOT6Q3I5F7 207 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 NCMAPQ5T1S8 102 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 MIC13Q5XKP0 118 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 RBMS3Q6XE24 437 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 ZNF709Q8N972 641 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 OR13D1Q8NGV5 346 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 RNASE6Q93091 150 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 MRPL20Q9BYC9 149 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 TMEM106BQ9NUM4 274 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 METTL1Q9UBP6 276 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 HELZ2Q9BYK8 2649 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 POLEQ07864 2286 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 C17orf112F2Z3M2 114 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 PHOX2AO14813 284 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 PAGE4O60829 102 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 CA2P00918 260 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 PLA2G2AP14555 144 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 OR10A7Q8NGE5 316 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 RAB1CQ92928 201 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 TMEM68Q96MH6 324 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 SLC35D1Q9NTN3 355 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 TMEM242Q9NWH2 141 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 CBY1Q9Y3M2 126 aa10.57□□□□□ -0.72
CDK5RAP1-201ENST00000339269 PPIAL4EA0A075B759 164 aa10.56□□□□□ -0.72
CDK5RAP1-201ENST00000339269 SMCO3A2RU48 225 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms