RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 OR5AN1Q8NGI8 311 aa13.21□□□□□ -0.29
SCNN1A-202ENST00000338748 ZNF596Q8TC21 504 aa13.21□□□□□ -0.29
SCNN1A-202ENST00000338748 MAP1LC3BQ9GZQ8 125 aa13.21□□□□□ -0.29
SCNN1A-202ENST00000338748 LOC102723971A0A1B0GUV8 181 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 SMCO3A2RU48 225 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 PPOXP50336 477 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 GCSAMLQ5JQS6 135 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 C1orf159Q96HA4 380 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 HARBI1Q96MB7 349 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 WDR83OSQ9Y284 106 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 A0A087X0M5 115 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 A0A1B0GX30 115 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 UPK2O00526 184 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 SNRNP70P08621 437 aaKnown RBP13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 SOHLH1Q5JUK2 328 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 C11orf71Q6IPW1 123 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 TREML4Q6UXN2 200 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 CLCC1Q96S66 551 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 NABP2Q9BQ15 211 aa13.2□□□□□ -0.3
SCNN1A-202ENST00000338748 M0R036 132 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 LINC00311Q8N616 119 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 SLC24A4Q8NFF2 622 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 TMPRSS5Q9H3S3 457 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 SMDT1Q9H4I9 107 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 PUS1Q9Y606 427 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 C7orf77A4D0Y5 90 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 CA2P00918 260 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 HSPB1P04792 205 aaKnown RBP13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 IFNA4P05014 189 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 BCL2P10415 239 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 ARSJQ5FYB0 599 aaPredicted RBP13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 FAM122CQ6P4D5 195 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 OR9G1Q8NH87 305 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 TMEM133Q9H2Q1 129 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 RPS10P5Q9NQ39 176 aa13.19□□□□□ -0.3
SCNN1A-202ENST00000338748 TRBV23-1A0A0A0MS06 115 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 APOA2P02652 100 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 NPY1RP25929 384 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 OR10G4Q8NGN3 311 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 OR10G9Q8NGN4 311 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 OR10G7Q8NGN6 311 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 RITA1Q96K30 269 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 MGST2Q99735 147 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 BET1LQ9NYM9 111 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 PRNDQ9UKY0 176 aa13.18□□□□□ -0.3
SCNN1A-202ENST00000338748 TEX50A0A1B0GTY4 177 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 E7EUB6 86 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 KBTBD11O94819 623 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 CTRB1P17538 263 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 ZNF137PP52743 207 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 RPP30P78346 268 aaKnown RBP13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 PRCDQ00LT1 54 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 CTRB2Q6GPI1 263 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 C8orf31Q8N9H6 132 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 OR10W1Q8NGF6 305 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 OSR1Q8TAX0 266 aaPredicted RBP13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 LHX4Q969G2 390 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 FAM122AQ96E09 287 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 CBLN4Q9NTU7 201 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 FLNCQ14315 2725 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 IGHV3-72A0A0B4J1Y9 119 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 LY86O95711 162 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 TMEM177Q53S58 311 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 ZNF709Q8N972 641 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 TMEM186Q96B77 213 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 RAB39BQ96DA2 213 aa13.17□□□□□ -0.3
SCNN1A-202ENST00000338748 MED13LQ71F56 2210 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 GNLYP22749 145 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 MOB3BQ86TA1 216 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 RAB24Q969Q5 203 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 ISOC2Q96AB3 205 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 FLYWCH2Q96CP2 140 aaKnown RBP13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 PLEKHA3Q9HB20 300 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 TPSG1Q9NRR2 321 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 ZNF257Q9Y2Q1 563 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 IGHV2-26A0A0B4J1V2 119 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 CTXND1A0A1B0GTU2 59 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 YIF1AO95070 293 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 SFTPCP11686 197 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 RAB11AP62491 216 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 C10orf55Q5SWW7 151 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 GATAD1Q8WUU5 269 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
SCNN1A-202ENST00000338748 C22orf46C9J442 243 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 H3BQ15 152 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 IGLV2-23P01705 113 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 DLK1P80370 383 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 WDR25Q64LD2 544 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 FAM90A2PQ658T7 463 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 FAM71F2Q6NXP2 309 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 ITLN2Q8WWU7 325 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 GGACTQ9BVM4 153 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 ENY2Q9NPA8 101 aa13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 LSM4Q9Y4Z0 139 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-202ENST00000338748 FSTL3O95633 263 aa13.15□□□□□ -0.31
SCNN1A-202ENST00000338748 IGLV1-47P01700 117 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms