RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 USF3Q68DE3 2245 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 A0A1W2PPE3 182 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 CXorf65A6NEN9 183 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 CCL3L1P16619 93 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
SRPRA-201ENST00000332118 RAB11AP62491 216 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 HAGHQ16775 308 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 OR9G1Q8NH87 305 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 TMEM167AQ8TBQ9 72 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 KCNIP2Q9NS61 270 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 IGLV1-47P01700 117 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 PNRC1Q12796 327 aaPredicted RBP11.1□□□□□ -0.63
SRPRA-201ENST00000332118 DTX2Q86UW9 622 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 PNKDQ8N490 385 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 BEND2Q8NDZ0 799 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 NDUFA4L2Q9NRX3 87 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 OR51B2Q9Y5P1 312 aa11.1□□□□□ -0.63
SRPRA-201ENST00000332118 IFNA1P01562 189 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 GRNP28799 593 aaKnown RBP11.09□□□□□ -0.63
SRPRA-201ENST00000332118 GNG10P50151 68 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 PAX2Q02962 417 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 MRGPRG-AS1Q2M3A8 158 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 LINC01560Q8TB33 94 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 NEIL1Q96FI4 390 aaPredicted RBP11.09□□□□□ -0.63
SRPRA-201ENST00000332118 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
SRPRA-201ENST00000332118 ACTR3CQ9C0K3 210 aaPredicted RBP11.09□□□□□ -0.63
SRPRA-201ENST00000332118 ZNF98A6NK75 572 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 TMEM250H0YL14 139 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 ACOT6Q3I5F7 207 aaPredicted RBP11.09□□□□□ -0.63
SRPRA-201ENST00000332118 CYB561D1Q8N8Q1 229 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 OR10G9Q8NGN4 311 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 OR10G7Q8NGN6 311 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 MGST2Q99735 147 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 GGTLC1Q9BX51 225 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 RPS10P5Q9NQ39 176 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 SIRT7Q9NRC8 400 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 RALYQ9UKM9 306 aaKnown RBP11.09□□□□□ -0.63
SRPRA-201ENST00000332118 ZGRF1Q86YA3 2104 aa11.09□□□□□ -0.63
SRPRA-201ENST00000332118 TEX50A0A1B0GTY4 177 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 H3BQ15 152 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 FFAR4Q5NUL3 377 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 TMEM133Q9H2Q1 129 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 NPVFQ9HCQ7 196 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 SMCO3A2RU48 225 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 YIF1AO95070 293 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 IGHV3-7P01780 117 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 APOA2P02652 100 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 MT-ND4LP03901 98 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 SAA1P0DJI8 122 aaPredicted RBP11.08□□□□□ -0.64
SRPRA-201ENST00000332118 ARSJQ5FYB0 599 aaPredicted RBP11.08□□□□□ -0.64
SRPRA-201ENST00000332118 OR4C13Q8NGP0 309 aa11.08□□□□□ -0.64
SRPRA-201ENST00000332118 CRYGBP07316 175 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 OR13C7P0DN81 318 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 USF1P22415 310 aaPredicted RBP11.07□□□□□ -0.64
SRPRA-201ENST00000332118 NPY1RP25929 384 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 MC5RP33032 325 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 RPL29P47914 159 aaKnown RBP11.07□□□□□ -0.64
SRPRA-201ENST00000332118 PSMB3P49720 205 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 CD81P60033 236 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 PRR20EP86478 221 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 PRR20CP86479 221 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 PRR20DP86480 221 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 PRR20BP86481 221 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 PRR20AP86496 221 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 C1QL4Q86Z23 238 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 VSTM2AQ8TAG5 236 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 HIST1H2BAQ96A08 127 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 CBLN4Q9NTU7 201 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 FAM90A27PA6NNH2 459 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 M0R036 132 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 HOXA1P49639 335 aaPredicted RBP11.07□□□□□ -0.64
SRPRA-201ENST00000332118 RAB13P51153 203 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 TVP23CQ96ET8 276 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 TXNDC17Q9BRA2 123 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 HEYLQ9NQ87 328 aaPredicted RBP11.07□□□□□ -0.64
SRPRA-201ENST00000332118 ARL2-SNX15V9GYD0 113 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 POLEQ07864 2286 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 RIF1Q5UIP0 2472 aaKnown RBP11.07□□□□□ -0.64
SRPRA-201ENST00000332118 hCG_1809904A0A1W2PP81 198 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 A0A1W2PR64 198 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 A0A1W2PRV1 198 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 LY6LH3BQJ8 138 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 CYB5BO43169 146 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 RBMXL2O75526 392 aaKnown RBP11.07□□□□□ -0.64
SRPRA-201ENST00000332118 SPINK9Q5DT21 86 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 ARFGEF3Q5TH69 2177 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 WDR25Q64LD2 544 aaPredicted RBP11.07□□□□□ -0.64
SRPRA-201ENST00000332118 NANPQ8TBE9 248 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 NEU4Q8WWR8 484 aaPredicted RBP11.07□□□□□ -0.64
SRPRA-201ENST00000332118 SLC39A9Q9NUM3 307 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 WASHC3Q9Y3C0 194 aa11.07□□□□□ -0.64
SRPRA-201ENST00000332118 COL8A2P25067 703 aa11.06□□□□□ -0.64
SRPRA-201ENST00000332118 MEF2BQ02080 365 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-201ENST00000332118 SSX2Q16385 188 aa11.06□□□□□ -0.64
SRPRA-201ENST00000332118 ZNF709Q8N972 641 aa11.06□□□□□ -0.64
SRPRA-201ENST00000332118 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
SRPRA-201ENST00000332118 GNG13Q9P2W3 67 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms