RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 FREM2Q5SZK8 3169 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 MORN2Q502X0 79 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 SPATA46Q5T0L3 261 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 MIC13Q5XKP0 118 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 SPINK14Q6IE38 97 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 FAM53AQ6NSI3 398 aaPredicted RBP15.04■□□□□ -0
CLSTN3-202ENST00000331148 POM121L2Q96KW2 1035 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 UHRF2Q96PU4 802 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 MGST2Q99735 147 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 TRGV10A0A0A0MS01 117 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 WISP2O76076 250 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 REG1AP05451 166 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 RFPL3SP0C7P2 107 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 GCHFRP30047 84 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 PDLIM3Q53GG5 364 aaPredicted RBP15.04■□□□□ -0
CLSTN3-202ENST00000331148 WIPI1Q5MNZ9 446 aaPredicted RBP15.04■□□□□ -0
CLSTN3-202ENST00000331148 TREML4Q6UXN2 200 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 GGTLC1Q9BX51 225 aa15.04■□□□□ -0
CLSTN3-202ENST00000331148 SPINK4O60575 86 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 MRPL33O75394 65 aaKnown RBP15.03■□□□□ -0
CLSTN3-202ENST00000331148 CX3CL1P78423 397 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 SLC35D1Q9NTN3 355 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 BET1LQ9NYM9 111 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 FOXG1P55316 489 aaPredicted RBP15.03■□□□□ -0
CLSTN3-202ENST00000331148 GFRA1P56159 465 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 CLDN18P56856 261 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 IGF2-ASQ6U949 168 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 ATOH7Q8N100 152 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 TAAR6Q96RI8 345 aa15.03■□□□□ -0
CLSTN3-202ENST00000331148 PTPRBP23467 1997 aa15.02■□□□□ -0
CLSTN3-202ENST00000331148 IGHV2OR16-5A0A0B4J2B6 119 aa15.02□□□□□ -0.01
CLSTN3-202ENST00000331148 CA2P00918 260 aa15.02□□□□□ -0.01
CLSTN3-202ENST00000331148 SRIP30626 198 aa15.02□□□□□ -0.01
CLSTN3-202ENST00000331148 MAJINQ3KP22 176 aa15.02□□□□□ -0.01
CLSTN3-202ENST00000331148 OR2D3Q8NGH3 330 aa15.02□□□□□ -0.01
CLSTN3-202ENST00000331148 OR52L2PQ8NGH6 319 aa15.02□□□□□ -0.01
CLSTN3-202ENST00000331148 ZNF292O60281 2723 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 IGHV2-26A0A0B4J1V2 119 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 BMPR1BO00238 502 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 RPL19P84098 196 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 LINC00696Q6ZRV3 163 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 LINC00470Q9BZP3 86 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 MS4A5Q9H3V2 200 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 KCNIP1Q9NZI2 227 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 IGHV2-70DA0A0C4DH43 119 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 CDIPTO14735 213 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 FBLN7Q53RD9 439 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 ATP1A1-AS1Q5TC04 95 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 C19orf35Q6ZS72 473 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 FAM19A2Q8N3H0 131 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 GALMQ96C23 342 aa15.01□□□□□ -0.01
CLSTN3-202ENST00000331148 C12orf77C9JDV5 145 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 OR10J4P0C629 311 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 ERVK11-1P61568 191 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 OR1C1Q15619 314 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 COX19Q49B96 90 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 SPATA31B1PQ5VZV4 182 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 STUMQ69YW2 141 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 WDR86Q86TI4 376 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 OR5B3Q8NH48 314 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 TSKUQ8WUA8 353 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 FAM173AQ9BQD7 235 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 BOKQ9UMX3 212 aaPredicted RBP15□□□□□ -0.01
CLSTN3-202ENST00000331148 PINLYPA6NC86 204 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 OR9G9P0C7N8 305 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 CENPWQ5EE01 88 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 ETFRF1Q6IPR1 90 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 VASH2Q86V25 355 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 BORCS7Q96B45 105 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 ZFHX2Q9C0A1 2572 aaPredicted RBP15□□□□□ -0.01
CLSTN3-202ENST00000331148 MUC6Q6W4X9 2439 aa15□□□□□ -0.01
CLSTN3-202ENST00000331148 IGHV1-69-2A0A0G2JMI3 117 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 LINC00473A8K010 186 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 AMY1AP04745 511 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 GDF1P27539 372 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 LINC00205P59089 165 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 SLC35B1P78383 322 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 ASCL5Q7RTU5 278 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 Q8IYB0 196 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 SSMEM1Q8WWF3 244 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 GSX1Q9H4S2 264 aaPredicted RBP14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 GTF3C1Q12789 2109 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 DMXL1Q9Y485 3027 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 CUL9Q8IWT3 2517 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 MED13Q9UHV7 2174 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 PRSS46E5RG02 174 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 MT-CO2P00403 227 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 NTF3P20783 257 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 TNFSF4P23510 183 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 GNG4P50150 75 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 TCL1AP56279 114 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 RNF151Q2KHN1 245 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 LCN12Q6JVE5 192 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 OR4C5Q8NGB2 326 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 SEPSECSQ9HD40 501 aaKnown RBP14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 CDC42EP3Q9UKI2 254 aa14.99□□□□□ -0.01
CLSTN3-202ENST00000331148 RIF1Q5UIP0 2472 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-202ENST00000331148 DIDO1Q9BTC0 2240 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-202ENST00000331148 NCKAP5O14513 1909 aa14.98□□□□□ -0.01
CLSTN3-202ENST00000331148 IGKV3D-15A0A087WSY6 115 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms