RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ZNF429Q86V71 674 aa15.14■□□□□ 0.01
EXOSC3-201ENST00000327304 DTD1Q8TEA8 209 aa15.14■□□□□ 0.01
EXOSC3-201ENST00000327304 CYSRT1A8MQ03 144 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 ZNF705EA8MWA4 302 aaPredicted RBP15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 IGHV4-38-2P0DP08 117 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 HBG1P69891 147 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 HBG2P69892 147 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 SPANXN5Q5MJ07 72 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 TMEM217Q8N7C4 229 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 RHOVQ96L33 236 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 AMMECR1Q9Y4X0 333 aaPredicted RBP15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 NUDT19A8MXV4 375 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 LY6LH3BQJ8 138 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 APOA2P02652 100 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 FGF2P09038 288 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 IL3RAP26951 378 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 RAB5CP51148 216 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 SPCS3P61009 180 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 BLOC1S1P78537 153 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 RELBQ01201 579 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 TMEM267Q0VDI3 215 aaPredicted RBP15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 SSX9Q7RTT3 188 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 OR5AN1Q8NGI8 311 aa15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 QTRT1Q9BXR0 403 aaKnown RBP15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 MRPL20Q9BYC9 149 aaKnown RBP15.13■□□□□ 0.01
EXOSC3-201ENST00000327304 SCAF4O95104 1147 aaKnown RBP15.12■□□□□ 0.01
EXOSC3-201ENST00000327304 METTL15P1P0C7V9 234 aa15.12■□□□□ 0.01
EXOSC3-201ENST00000327304 HTR1DP28221 377 aa15.12■□□□□ 0.01
EXOSC3-201ENST00000327304 KLF17Q5JT82 389 aaPredicted RBP15.12■□□□□ 0.01
EXOSC3-201ENST00000327304 RUSC1-AS1Q66K80 236 aa15.12■□□□□ 0.01
EXOSC3-201ENST00000327304 C17orf50Q8WW18 174 aa15.12■□□□□ 0.01
EXOSC3-201ENST00000327304 GNPNAT1Q96EK6 184 aaPredicted RBP15.12■□□□□ 0.01
EXOSC3-201ENST00000327304 IGHV1-69DA0A0B4J2H0 117 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 CEBPZOSA8MTT3 80 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 I3L521 148 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 NPFFO15130 113 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 IGHV1-69P01742 117 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 TOR2AQ5JU69 321 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 OR4A47Q6IF82 309 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 VKORC1L1Q8N0U8 176 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 HSD17B11Q8NBQ5 300 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 OSR1Q8TAX0 266 aaPredicted RBP15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 TSNAXQ99598 290 aaKnown RBP15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 PLA2G2EQ9NZK7 142 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 DPM3Q9P2X0 92 aa15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 STRAPQ9Y3F4 350 aaKnown RBP15.11■□□□□ 0.01
EXOSC3-201ENST00000327304 H0YJW9 148 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 IFNA17P01571 189 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 IL6RP08887 468 aaPredicted RBP15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 PAX6P26367 422 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 SAA4P35542 130 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 LGALS4P56470 323 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 OR2B8PP59922 312 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 TPTE2P1Q5T6R2 138 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 BRD3OSQ6XYD6 125 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 TGIF2LXQ8IUE1 241 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 RBMXL1Q96E39 390 aaKnown RBP15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 AJUBAQ96IF1 538 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 NABP2Q9BQ15 211 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 PARP11Q9NR21 331 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 FOXA2Q9Y261 457 aaPredicted RBP15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 RAB19A4D1S5 217 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 C15orf61A6NNL5 157 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 IFNA5P01569 189 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 ATP6V0CP27449 155 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 HAPLN4Q86UW8 402 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 PDPNQ86YL7 162 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 ZDHHC16Q969W1 377 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 MARC2Q969Z3 335 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 RPEQ96AT9 228 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 PARD6GQ9BYG4 376 aaPredicted RBP15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 HILPDAQ9Y5L2 63 aa15.1■□□□□ 0.01
EXOSC3-201ENST00000327304 CD5LO43866 347 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 ARL16Q0P5N6 197 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 ATP6V1FQ16864 119 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 TMEM177Q53S58 311 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 MINOS1Q5TGZ0 78 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 SPNS3Q6ZMD2 512 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 DYNAPQ8N1N2 210 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 CLCC1Q96S66 551 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 SH3BGRL3Q9H299 93 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 TMEM14BQ9NUH8 114 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 TBL2Q9Y4P3 447 aaKnown RBP15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 MINOS1-NBL1R4GNA1 71 aa15.09■□□□□ 0.01
EXOSC3-201ENST00000327304 UMAD1C9J7I0 102 aa15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 TRIM77I1YAP6 450 aa15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 IGKV1-16P04430 117 aa15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 CEACAM3P40198 252 aa15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 RPP30P78346 268 aaKnown RBP15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 PXDC1Q5TGL8 231 aa15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 OR4C12Q96R67 309 aa15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 BET1LQ9NYM9 111 aa15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 NUP50Q9UKX7 468 aa15.08■□□□□ 0.01
EXOSC3-201ENST00000327304 TRAV3A0A0B4J244 114 aa15.08■□□□□ 0
EXOSC3-201ENST00000327304 PMS2P5A8MQ11 134 aa15.08■□□□□ 0
EXOSC3-201ENST00000327304 OR8U8P0C7N1 319 aa15.08■□□□□ 0
EXOSC3-201ENST00000327304 MC5RP33032 325 aa15.08■□□□□ 0
EXOSC3-201ENST00000327304 RAB13P51153 203 aa15.08■□□□□ 0
EXOSC3-201ENST00000327304 SSX2Q16385 188 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms