RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ARSJQ5FYB0 599 aaPredicted RBP13.84□□□□□ -0.19
SSH1-201ENST00000326470 OR4B1Q8NGF8 309 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 SFXN3Q9BWM7 321 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 FREM2Q5SZK8 3169 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 AREGP15514 252 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 TRAT1Q6PIZ9 186 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 WDR82Q6UXN9 313 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 LINC00696Q6ZRV3 163 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 STPG3Q8N7X2 389 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 CXXC4Q9H2H0 198 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 GNB4Q9HAV0 340 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 ZNF586Q9NXT0 402 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 RNF114Q9Y508 228 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 PTPRBP23467 1997 aa13.84□□□□□ -0.19
SSH1-201ENST00000326470 FOXH1O75593 365 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 ERVK-16P61578 105 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 TEPPQ6URK8 271 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 VKORC1L1Q8N0U8 176 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 OR8I2Q8N0Y5 310 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 Q8N976 141 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 ST6GALNAC3Q8NDV1 305 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 RNF2Q99496 336 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 DCTN5Q9BTE1 182 aa13.83□□□□□ -0.19
SSH1-201ENST00000326470 OPN3Q9H1Y3 402 aaPredicted RBP13.83□□□□□ -0.19
SSH1-201ENST00000326470 TRAV3A0A0B4J244 114 aa13.83□□□□□ -0.2
SSH1-201ENST00000326470 MT-ND6P03923 174 aa13.83□□□□□ -0.2
SSH1-201ENST00000326470 MEOX1P50221 254 aa13.83□□□□□ -0.2
SSH1-201ENST00000326470 MRPS11P82912 194 aaKnown RBP13.83□□□□□ -0.2
SSH1-201ENST00000326470 BATFQ16520 125 aa13.83□□□□□ -0.2
SSH1-201ENST00000326470 LTC4SQ16873 150 aa13.83□□□□□ -0.2
SSH1-201ENST00000326470 TCF19Q9Y242 345 aa13.83□□□□□ -0.2
SSH1-201ENST00000326470 GPR179Q6PRD1 2367 aa13.83□□□□□ -0.2
SSH1-201ENST00000326470 TRGV8A0A0C4DH27 118 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 OR10J4P0C629 311 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 OR5I1Q13606 314 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 ZPBPQ9BS86 351 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 SAA2-SAA4A0A096LPE2 208 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 DIRC3C9JPN6 131 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 M0R1X1 148 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 CTRLP40313 264 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 KRTDAPP60985 99 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 CX3CL1P78423 397 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 RPL19P84098 196 aaKnown RBP13.82□□□□□ -0.2
SSH1-201ENST00000326470 SMIM21Q3B7S5 101 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 OR10J3Q5JRS4 329 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 COL5A1-AS1Q5SY13 56 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 WDR73Q6P4I2 378 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 OR4P4Q8NGL7 312 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 FAM103A1Q9BTL3 118 aaKnown RBP13.82□□□□□ -0.2
SSH1-201ENST00000326470 SPRY4Q9C004 299 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 TMEM140Q9NV12 185 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 ARL2-SNX15V9GYD0 113 aa13.82□□□□□ -0.2
SSH1-201ENST00000326470 RAB31Q13636 194 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 MORN2Q502X0 79 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 C1orf174Q8IYL3 243 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 FAM234AQ9H0X4 552 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 GNG12Q9UBI6 72 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 NAT8BQ9UHF3 227 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 TBL2Q9Y4P3 447 aaKnown RBP13.81□□□□□ -0.2
SSH1-201ENST00000326470 CGAP01215 116 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 IGHV1-2P23083 117 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 GNG4P50150 75 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 FAM90A1Q86YD7 464 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 FAM216AQ8WUB2 273 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 PLPPR2Q96GM1 343 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 MSL2Q9HCI7 577 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 NRN1Q9NPD7 142 aa13.81□□□□□ -0.2
SSH1-201ENST00000326470 HCFC1P51610 2035 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 HELTA6NFD8 242 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 COL8A2P25067 703 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 COX19Q49B96 90 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 CENPWQ5EE01 88 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 CD177Q8N6Q3 437 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 JPT1Q9UK76 154 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 SLC45A2Q9UMX9 530 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
SSH1-201ENST00000326470 CBY1Q9Y3M2 126 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 MMP23AO75900 390 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 PRR20EP86478 221 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 PRR20CP86479 221 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 PRR20DP86480 221 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 PRR20BP86481 221 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 PRR20AP86496 221 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 EDDM3AQ14507 147 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 RPL39P5Q59GN2 51 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 TMEM136Q6ZRR5 245 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 GCNT2Q8N0V5 402 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 KCNS1Q96KK3 526 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 S1PR3Q99500 378 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 SLC25A10Q9UBX3 287 aaPredicted RBP13.8□□□□□ -0.2
SSH1-201ENST00000326470 ZFP30Q9Y2G7 519 aa13.8□□□□□ -0.2
SSH1-201ENST00000326470 KLRC4-KLRK1H3BQV0 150 aa13.79□□□□□ -0.2
SSH1-201ENST00000326470 NPY1RP25929 384 aa13.79□□□□□ -0.2
SSH1-201ENST00000326470 AMTP48728 403 aa13.79□□□□□ -0.2
SSH1-201ENST00000326470 SUMO1P63165 101 aaKnown RBP13.79□□□□□ -0.2
SSH1-201ENST00000326470 INO80CQ6PI98 192 aaPredicted RBP13.79□□□□□ -0.2
SSH1-201ENST00000326470 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
SSH1-201ENST00000326470 DEFB127Q9H1M4 99 aa13.79□□□□□ -0.2
SSH1-201ENST00000326470 OSTCQ9NRP0 149 aa13.79□□□□□ -0.2
SSH1-201ENST00000326470 A0A1W2PS18 150 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms