RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TNCP24821 2201 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 ADMP35318 185 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 UNQ5815/PRO19632Q6UWF5 114 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 PQLC2Q6ZP29 291 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 MOB3BQ86TA1 216 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 OR5P3Q8WZ94 311 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 GMPPAQ96IJ6 420 aaPredicted RBP12.87□□□□□ -0.35
VARS2-201ENST00000321897 SLC35E1Q96K37 410 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 EGLN1Q9GZT9 426 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 TRBV24-1A0A075B6N3 115 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 OOEPA6NGQ2 149 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 OPRK1P41145 380 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 SPTBN4Q9H254 2564 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 LY6G6EA0A0G2JKS1 128 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 C12orf77C9JDV5 145 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 ORM2P19652 201 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 TAS2R45P59539 299 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 ZNF525Q8N782 197 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 DIRC2Q96SL1 478 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 MIEN1Q9BRT3 115 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 DERL1Q9BUN8 251 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 U3KQA8 63 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 RAMP3O60896 148 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 OR4D5Q8NGN0 318 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 POM121L2Q96KW2 1035 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 RNF2Q99496 336 aa12.86□□□□□ -0.35
VARS2-201ENST00000321897 COL4A4P53420 1690 aaPredicted RBP12.86□□□□□ -0.35
VARS2-201ENST00000321897 C17orf98A8MV24 154 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 RTL8BQ17RB0 113 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 DTX1Q86Y01 620 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 MMD2Q8IY49 270 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 OR2T6Q8NHC8 308 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 QTRT1Q9BXR0 403 aaKnown RBP12.85□□□□□ -0.35
VARS2-201ENST00000321897 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
VARS2-201ENST00000321897 TMEM250H0YL14 139 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 APCSP02743 223 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 CCL1P22362 96 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 NHLH1Q02575 133 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 SCO2A0A1W2PP80 73 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 CRYBB3P26998 211 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 FOXA3P55318 350 aaPredicted RBP12.85□□□□□ -0.35
VARS2-201ENST00000321897 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
VARS2-201ENST00000321897 FAM90A2PQ658T7 463 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 RAB37Q96AX2 223 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 WDYHV1Q96HA8 205 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 C1QTNF5Q9BXJ0 243 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 RAB9BQ9NP90 201 aa12.85□□□□□ -0.35
VARS2-201ENST00000321897 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 H3BTX0 84 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 UCP1P25874 307 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 RPL31P62899 125 aaKnown RBP12.84□□□□□ -0.35
VARS2-201ENST00000321897 FAM27E3Q08E93 113 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 C20orf204Q6ZNR8 217 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 IGLV3-32A0A0A0MS00 114 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 FOXF2Q12947 444 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 WDR73Q6P4I2 378 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 PROK2Q9HC23 129 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 LAMTOR2Q9Y2Q5 125 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 DPRXA6NFQ7 191 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 NTN3O00634 580 aaPredicted RBP12.84□□□□□ -0.35
VARS2-201ENST00000321897 CECR9P0C854 216 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 TDGF1P3P51864 188 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 MUC15Q8N387 334 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 OR13A1Q8NGR1 328 aa12.84□□□□□ -0.35
VARS2-201ENST00000321897 ALKBH7Q9BT30 221 aaPredicted RBP12.84□□□□□ -0.35
VARS2-201ENST00000321897 OR5AL1P0C617 328 aa12.83□□□□□ -0.35
VARS2-201ENST00000321897 IGHV1-2P23083 117 aa12.83□□□□□ -0.35
VARS2-201ENST00000321897 COMPP49747 757 aaPredicted RBP12.83□□□□□ -0.35
VARS2-201ENST00000321897 K7ERU9 68 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 COX7A2P2O60397 106 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 RPP25LQ8N5L8 163 aaKnown RBP12.83□□□□□ -0.36
VARS2-201ENST00000321897 EML6Q6ZMW3 1958 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 ANKRD11Q6UB99 2663 aaPredicted RBP12.83□□□□□ -0.36
VARS2-201ENST00000321897 IFITM10A6NMD0 228 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 TMEM50AO95807 157 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 SFTPCP11686 197 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 LRRC75BQ2VPJ9 315 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 LYL1P12980 280 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 ERHP84090 104 aaKnown RBP12.83□□□□□ -0.36
VARS2-201ENST00000321897 ID3Q02535 119 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 LDLRAD2Q5SZI1 272 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 INO80CQ6PI98 192 aaPredicted RBP12.83□□□□□ -0.36
VARS2-201ENST00000321897 PMCHL2Q9BQD1 86 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 FBLN5Q9UBX5 448 aa12.83□□□□□ -0.36
VARS2-201ENST00000321897 ZNF503-AS2A6NEH8 195 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 ZNF891A8MT65 544 aaPredicted RBP12.82□□□□□ -0.36
VARS2-201ENST00000321897 Q5PR19 223 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 SH2D2AQ9NP31 389 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 SPRR3Q9UBC9 169 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 ODAMA1E959 279 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 RELBQ01201 579 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 TGIF2LYQ8IUE0 185 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 GBGT1Q8N5D6 347 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 C9orf106Q8NAJ2 232 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 OR8G5Q8NG78 346 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
VARS2-201ENST00000321897 GSX1Q9H4S2 264 aaPredicted RBP12.82□□□□□ -0.36
VARS2-201ENST00000321897 LPAR2Q9HBW0 351 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms