RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 MT-CO2P00403 227 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 ZNF83P51522 516 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 LPAL2Q16609 132 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 ALKBH6Q3KRA9 238 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 VKORC1L1Q8N0U8 176 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 PLPPR2Q96GM1 343 aa14.85□□□□□ -0.03
PRKCB-202ENST00000321728 TRGV10A0A0A0MS01 117 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 FAM166BA8MTA8 275 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 GNG4P50150 75 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 FXYD3Q14802 87 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 EFNB3Q15768 340 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 WDR73Q6P4I2 378 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 DOLPP1Q86YN1 238 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 TDHQ8IZJ6 230 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 OR4P4Q8NGL7 312 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 DPRXA6NFQ7 191 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 MT-ND6P03923 174 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 SRIP30626 198 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 RHOBP62745 196 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 CENPWQ5EE01 88 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 OR10J3Q5JRS4 329 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 ATOH7Q8N100 152 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 FAM19A2Q8N3H0 131 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 RNASE7Q9H1E1 156 aaKnown RBP14.84□□□□□ -0.03
PRKCB-202ENST00000321728 HCFC1P51610 2035 aa14.84□□□□□ -0.03
PRKCB-202ENST00000321728 CCL25O15444 150 aa14.83□□□□□ -0.03
PRKCB-202ENST00000321728 SLC35E4Q6ICL7 350 aa14.83□□□□□ -0.03
PRKCB-202ENST00000321728 WDR31Q8NA23 367 aa14.83□□□□□ -0.03
PRKCB-202ENST00000321728 HELTA6NFD8 242 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 ZNF324O75467 553 aaPredicted RBP14.83□□□□□ -0.04
PRKCB-202ENST00000321728 CGAP01215 116 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 C3orf79P0CE67 100 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 NTF3P20783 257 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 CX3CL1P78423 397 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 ZNF826PQ6ZT77 177 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 C11orf52Q96A22 123 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 COQ2Q96H96 371 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 LY96Q9Y6Y9 160 aa14.83□□□□□ -0.04
PRKCB-202ENST00000321728 HINT1P49773 126 aaPredicted RBP14.82□□□□□ -0.04
PRKCB-202ENST00000321728 FOXF2Q12947 444 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 MRPL54Q6P161 138 aaKnown RBP14.82□□□□□ -0.04
PRKCB-202ENST00000321728 PQLC2Q6ZP29 291 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 TMEM136Q6ZRR5 245 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 Q6ZVH6 145 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 STPG3Q8N7X2 389 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 RNASE8Q8TDE3 154 aaKnown RBP14.82□□□□□ -0.04
PRKCB-202ENST00000321728 ACTL6BO94805 426 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 LEMD1Q68G75 181 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 Q6ZR03 302 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 KLHDC1Q8N7A1 406 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 BORCS7Q96B45 105 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 NPVFQ9HCQ7 196 aa14.82□□□□□ -0.04
PRKCB-202ENST00000321728 CRYBB3P26998 211 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 PRRX1P54821 245 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 TBC1D28Q2M2D7 210 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 ORAOV1Q8WV07 137 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 GP6Q9HCN6 339 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 SIT1Q9Y3P8 196 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 MED13Q9UHV7 2174 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 GFRA3O60609 400 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 CELA3BP08861 270 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 MAGEA5P43359 124 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 GPR12P47775 334 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 GCNT2Q8N0V5 402 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 OR13A1Q8NGR1 328 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 OBP2BQ9NPH6 170 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 B4GALT7Q9UBV7 327 aa14.81□□□□□ -0.04
PRKCB-202ENST00000321728 SPENQ96T58 3664 aaKnown RBP14.81□□□□□ -0.04
PRKCB-202ENST00000321728 SAA2-SAA4A0A096LPE2 208 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 PRSS46E5RG02 174 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 MMP23AO75900 390 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 VDAC2P45880 294 aaPredicted RBP14.8□□□□□ -0.04
PRKCB-202ENST00000321728 NANOS1Q8WY41 292 aaKnown RBP14.8□□□□□ -0.04
PRKCB-202ENST00000321728 SERTAD4Q9NUC0 356 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 LOXL2Q9Y4K0 774 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 TRAV3A0A0B4J244 114 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 TMPRSS3P57727 454 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 ERVK-16P61578 105 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 MAJINQ3KP22 176 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 ANKRD39Q53RE8 183 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 ZNF766Q5HY98 468 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 TEPPQ6URK8 271 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 NIT1Q86X76 327 aa14.8□□□□□ -0.04
PRKCB-202ENST00000321728 BMPR1BO00238 502 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 WISP2O76076 250 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 DUTP33316 252 aaKnown RBP14.79□□□□□ -0.04
PRKCB-202ENST00000321728 PSG5Q15238 335 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 TIGITQ495A1 244 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 UNQ5815/PRO19632Q6UWF5 114 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 C1orf159Q96HA4 380 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 FAM173AQ9BQD7 235 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 DCTN5Q9BTE1 182 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 LSM4Q9Y4Z0 139 aaKnown RBP14.79□□□□□ -0.04
PRKCB-202ENST00000321728 CFAP47Q6ZTR5 3102 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 PCSK5Q92824 1860 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 SMPD2O60906 423 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 RAB31Q13636 194 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 MIR17HGQ75NE6 70 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 TSKUQ8WUA8 353 aa14.79□□□□□ -0.04
PRKCB-202ENST00000321728 CA2P00918 260 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms