RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ZNF709Q8N972 641 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 LINC00052Q96N35 136 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 FOXA2Q9Y261 457 aaPredicted RBP11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 A8MXK9 166 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 UPK2O00526 184 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 KBTBD11O94819 623 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 UQCC3Q6UW78 93 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 HAPLN4Q86UW8 402 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 PCGF1Q9BSM1 259 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 RSG1Q9BU20 258 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 RFNGQ9Y644 331 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 MED13LQ71F56 2210 aa11.8□□□□□ -0.52
SHCBP1-201ENST00000303383 ZNF462Q96JM2 2506 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 RAB2AP61019 212 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 ETV3LQ6ZN32 361 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 STPG2Q8N412 459 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 ZNF843Q8N446 348 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 ARHGAP32A7KAX9 2087 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 HRNRQ86YZ3 2850 aaPredicted RBP11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 ARG1P05089 322 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 CFAP161Q6P656 301 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 BET1LQ9NYM9 111 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 SRRM4A7MD48 611 aaKnown RBP11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 TLE4Q04727 773 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 TMEM177Q53S58 311 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 ST6GALNAC6Q969X2 333 aa11.79□□□□□ -0.52
SHCBP1-201ENST00000303383 FAM208BQ5VWN6 2430 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 BUB1B-PAK6H3BSN5 160 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 FGF7P21781 194 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 ZNF137PP52743 207 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 LRRC75BQ2VPJ9 315 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 BEND2Q8NDZ0 799 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 BPIFCQ8NFQ6 507 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 WDR61Q9GZS3 305 aaKnown RBP11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 TMEM231Q9H6L2 316 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 ACTL6BO94805 426 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 APOC3P02656 99 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 SNCAP37840 140 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 PDLIM4P50479 330 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 LY6G5BQ8NDX9 201 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 TAF15Q92804 592 aaKnown RBP eCLIP11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 C12orf57Q99622 126 aa11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 KLF2Q9Y5W3 355 aaPredicted RBP11.78□□□□□ -0.52
SHCBP1-201ENST00000303383 A6NJY4 79 aa11.77□□□□□ -0.52
SHCBP1-201ENST00000303383 M0R1W7 72 aa11.77□□□□□ -0.52
SHCBP1-201ENST00000303383 H2AFB1P0C5Y9 115 aa11.77□□□□□ -0.52
SHCBP1-201ENST00000303383 USF1P22415 310 aaPredicted RBP11.77□□□□□ -0.52
SHCBP1-201ENST00000303383 RPL8P62917 257 aaKnown RBP11.77□□□□□ -0.52
SHCBP1-201ENST00000303383 BPESC1Q9GZL8 116 aa11.77□□□□□ -0.52
SHCBP1-201ENST00000303383 EIF5A2Q9GZV4 153 aaKnown RBP11.77□□□□□ -0.52
SHCBP1-201ENST00000303383 TNCP24821 2201 aa11.77□□□□□ -0.52
SHCBP1-201ENST00000303383 NPY1RP25929 384 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 ELLP55199 621 aaPredicted RBP11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 LCN2P80188 198 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 BTNL8Q6UX41 500 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 SLC24A4Q8NFF2 622 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 C15orf62A8K5M9 175 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 IGLV1-47P01700 117 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 MYOD1P15172 320 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 HTR1DP28221 377 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 CEACAM3P40198 252 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
SHCBP1-201ENST00000303383 A0A1W2PRD5 423 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 A0A1W2PRF3 423 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 A0A1W2PRM7 423 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 SLC25A17O43808 307 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 VDAC2P45880 294 aaPredicted RBP11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 OR5B3Q8NH48 314 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 SPG11Q96JI7 2443 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 USP9XQ93008 2570 aaPredicted RBP11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 LGALS7P47929 136 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 LGALS4P56470 323 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 DEFA5Q01523 94 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 OR1L8Q8NGR8 309 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 SFT2D1Q8WV19 159 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 PSMG3Q9BT73 122 aaPredicted RBP11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 PBDC1Q9BVG4 233 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 IGHV1-3A0A0C4DH29 117 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 C17orf112F2Z3M2 114 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 SERF2P84101 59 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 COMMD1Q8N668 190 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 LFNGQ8NES3 379 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 FAM96BQ9Y3D0 163 aa11.76□□□□□ -0.53
SHCBP1-201ENST00000303383 RRHO14718 337 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 IGHV2-5P01817 119 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 RNF224P0DH78 156 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 CD1BP29016 333 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 ERHP84090 104 aaKnown RBP11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 TEX50A0A1B0GTY4 177 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 F8W036 122 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 COX6B1P14854 86 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 PLGLAQ15195 96 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 TUSC1Q2TAM9 212 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 OR4P4Q8NGL7 312 aa11.75□□□□□ -0.53
SHCBP1-201ENST00000303383 OR4A5Q8NH83 315 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms