RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 EIF3GO75821 320 aaKnown RBP eCLIP17.33■□□□□ 0.37
SOX17-201ENST00000297316 FOLR2P14207 255 aa17.33■□□□□ 0.37
SOX17-201ENST00000297316 GPR6P46095 362 aaPredicted RBP17.33■□□□□ 0.37
SOX17-201ENST00000297316 GNB2P62879 340 aa17.33■□□□□ 0.37
SOX17-201ENST00000297316 HABP2Q14520 560 aaPredicted RBP17.33■□□□□ 0.37
SOX17-201ENST00000297316 TMEM147Q9BVK8 224 aa17.33■□□□□ 0.37
SOX17-201ENST00000297316 PATZ1Q9HBE1 687 aaKnown RBP17.33■□□□□ 0.37
SOX17-201ENST00000297316 PAX6P26367 422 aa17.33■□□□□ 0.36
SOX17-201ENST00000297316 EFNA4P52798 201 aa17.33■□□□□ 0.36
SOX17-201ENST00000297316 ELLP55199 621 aaPredicted RBP17.33■□□□□ 0.36
SOX17-201ENST00000297316 AWAT1Q58HT5 328 aa17.33■□□□□ 0.36
SOX17-201ENST00000297316 ZNF429Q86V71 674 aa17.33■□□□□ 0.36
SOX17-201ENST00000297316 A0A087X0M5 115 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 A0A1B0GX30 115 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 RRHO14718 337 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 SNRNP70P08621 437 aaKnown RBP17.32■□□□□ 0.36
SOX17-201ENST00000297316 POU2AF1Q16633 256 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 RAB39BQ96DA2 213 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 TMEM14BQ9NUH8 114 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 ONECUT1Q9UBC0 465 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 LFNGQ8NES3 379 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 OR9G1Q8NH87 305 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 HIST1H2BAQ96A08 127 aa17.32■□□□□ 0.36
SOX17-201ENST00000297316 HEYLQ9NQ87 328 aaPredicted RBP17.32■□□□□ 0.36
SOX17-201ENST00000297316 OVOL3O00110 214 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 IGKV1D-33P01593 117 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 IGKV1-33P01594 117 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 IL6RP08887 468 aaPredicted RBP17.31■□□□□ 0.36
SOX17-201ENST00000297316 RAB5BP61020 215 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 ATP6V1FQ16864 119 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 VWC2Q2TAL6 325 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 DPPA3Q6W0C5 159 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 C8orf46Q8TAG6 207 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 ZNF596Q8TC21 504 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 PINX1Q96BK5 328 aaKnown RBP17.31■□□□□ 0.36
SOX17-201ENST00000297316 FOXA2Q9Y261 457 aaPredicted RBP17.31■□□□□ 0.36
SOX17-201ENST00000297316 IGHV2-26A0A0B4J1V2 119 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 C7orf77A4D0Y5 90 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 H0YJW9 148 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 COX7A1P24310 79 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 ACSM6Q6P461 480 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 LINC00311Q8N616 119 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 ST6GALNAC6Q969X2 333 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 C20orf24Q9BUV8 137 aa17.31■□□□□ 0.36
SOX17-201ENST00000297316 SSBP3Q9BWW4 388 aaPredicted RBP17.31■□□□□ 0.36
SOX17-201ENST00000297316 HRASP01112 189 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 IFNA10P01566 189 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 IFNA4P05014 189 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 FGF7P21781 194 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 ARF6P62330 175 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 TLE4Q04727 773 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 RTL8BQ17RB0 113 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 LY6G5BQ8NDX9 201 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 RCC1LQ96I51 464 aaKnown RBP17.3■□□□□ 0.36
SOX17-201ENST00000297316 M0R036 132 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 MDKP21741 143 aaPredicted RBP17.3■□□□□ 0.36
SOX17-201ENST00000297316 HAGHQ16775 308 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 HIPK2Q9H2X6 1198 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 KIAA1456Q9P272 454 aa17.3■□□□□ 0.36
SOX17-201ENST00000297316 CSMD2Q7Z408 3487 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 A0A1B0GW64 132 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 SAA1P0DJI8 122 aaPredicted RBP17.29■□□□□ 0.36
SOX17-201ENST00000297316 MEOX2P50222 304 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 RAB2AP61019 212 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 SNRPEP62304 92 aaKnown RBP17.29■□□□□ 0.36
SOX17-201ENST00000297316 SERF2P84101 59 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 CENPVQ7Z7K6 275 aaPredicted RBP17.29■□□□□ 0.36
SOX17-201ENST00000297316 Q8N7P7 452 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 C8orf31Q8N9H6 132 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 OR5AN1Q8NGI8 311 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 ISOC2Q96AB3 205 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 PBDC1Q9BVG4 233 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 RBFOX3A6NFN3 312 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 PRSS46E5RG02 174 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 IGHV4-39P01824 125 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 OPN1MWP04001 364 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 LIPFP07098 398 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 OPN1MW2P0DN77 364 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 OPN1MW3P0DN78 364 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 FGF8P55075 233 aaPredicted RBP17.29■□□□□ 0.36
SOX17-201ENST00000297316 HSPE1P61604 102 aaKnown RBP17.29■□□□□ 0.36
SOX17-201ENST00000297316 CTAG1AP78358 180 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 LCN15Q6UWW0 184 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 NABP2Q9BQ15 211 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 SIRT7Q9NRC8 400 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 OR51B2Q9Y5P1 312 aa17.29■□□□□ 0.36
SOX17-201ENST00000297316 A1L4Q6 167 aa17.28■□□□□ 0.36
SOX17-201ENST00000297316 C1orf196B1AJZ1 125 aa17.28■□□□□ 0.36
SOX17-201ENST00000297316 UPK2O00526 184 aa17.28■□□□□ 0.36
SOX17-201ENST00000297316 ZFP36P26651 326 aaKnown RBP17.28■□□□□ 0.36
SOX17-201ENST00000297316 TMEM41BQ5BJD5 291 aa17.28■□□□□ 0.36
SOX17-201ENST00000297316 NPCDR1Q9BY65 106 aa17.28■□□□□ 0.36
SOX17-201ENST00000297316 BPESC1Q9GZL8 116 aa17.28■□□□□ 0.36
SOX17-201ENST00000297316 TIMM9Q9Y5J7 89 aa17.28■□□□□ 0.36
SOX17-201ENST00000297316 LOC105371242A0A075B767 164 aa17.27■□□□□ 0.36
SOX17-201ENST00000297316 BTBD17A6NE02 478 aa17.27■□□□□ 0.36
SOX17-201ENST00000297316 OR13C7P0DN81 318 aa17.27■□□□□ 0.36
SOX17-201ENST00000297316 IGFBPL1Q8WX77 278 aa17.27■□□□□ 0.36
SOX17-201ENST00000297316 TMEM186Q96B77 213 aa17.27■□□□□ 0.36
SOX17-201ENST00000297316 CHD6Q8TD26 2715 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms