RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 PINLYPA6NC86 204 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 USF1P22415 310 aaPredicted RBP8.54□□□□□ -1.04
LMX1A-201ENST00000294816 RHOBP62745 196 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
LMX1A-201ENST00000294816 WDR86Q86TI4 376 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 TP73-AS1Q9UF72 201 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 POLDIP2Q9Y2S7 368 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 KIAA1549Q9HCM3 1950 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 TRAV9-1A0A075B6T8 112 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 OR7C2O60412 319 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 APCSP02743 223 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 ARR3P36575 388 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 FOLR3P41439 243 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 ZNF718Q3SXZ3 478 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 TMEM136Q6ZRR5 245 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 ZBTB34Q8NCN2 500 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 DCTN5Q9BTE1 182 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 SFXN3Q9BWM7 321 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 CLEC7AQ9BXN2 247 aa8.54□□□□□ -1.04
LMX1A-201ENST00000294816 ZNF331Q9NQX6 463 aaPredicted RBP8.54□□□□□ -1.04
LMX1A-201ENST00000294816 FRYQ5TBA9 3013 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 M0R2Z0 102 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 BMPR1BO00238 502 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 CELA3AP09093 270 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 P0C879 139 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 EFNB3Q15768 340 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 NIT1Q86X76 327 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 STPG3Q8N7X2 389 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 TSKUQ8WUA8 353 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 FAM216AQ8WUB2 273 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 HSD17B10Q99714 261 aaKnown RBP8.53□□□□□ -1.04
LMX1A-201ENST00000294816 CELSR3Q9NYQ7 3312 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 LOC102723996A0A087X1L8 192 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 TRBV9A0A0B4J1U6 114 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 MT-ND6P03923 174 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 OR10J4P0C629 311 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 ERVK-16P61578 105 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 ALKBH6Q3KRA9 238 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 DCAF12Q5T6F0 453 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 SPINK14Q6IE38 97 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 MIR17HGQ75NE6 70 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 ZNF439Q8NDP4 499 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 LOXL4Q96JB6 756 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 OBP2BQ9NPH6 170 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 MBNL3Q9NUK0 354 aaKnown RBP8.53□□□□□ -1.04
LMX1A-201ENST00000294816 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 TIMM8BQ9Y5J9 83 aaPredicted RBP8.53□□□□□ -1.04
LMX1A-201ENST00000294816 MPDU1O75352 247 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 TNFSF4P23510 183 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 GPR12P47775 334 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 SH2D2AQ9NP31 389 aa8.53□□□□□ -1.04
LMX1A-201ENST00000294816 TRAV3A0A0B4J244 114 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 M0R1X1 148 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 ITGB1BP1O14713 200 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 KLF7O75840 302 aaPredicted RBP8.52□□□□□ -1.05
LMX1A-201ENST00000294816 AMY1AP04745 511 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 TRIP6Q15654 476 aaKnown RBP8.52□□□□□ -1.05
LMX1A-201ENST00000294816 OR10J3Q5JRS4 329 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 SLC24A4Q8NFF2 622 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 FAM122AQ96E09 287 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 WDR54Q9H977 334 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 GNG12Q9UBI6 72 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 KMT2EQ8IZD2 1858 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 AHCTF1Q8WYP5 2266 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 LOC105371242A0A075B767 164 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 OOEPA6NGQ2 149 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 GPR6P46095 362 aaPredicted RBP8.52□□□□□ -1.05
LMX1A-201ENST00000294816 CLDN18P56856 261 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 CX3CL1P78423 397 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 RAB31Q13636 194 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 IBA57Q5T440 356 aaKnown RBP8.52□□□□□ -1.05
LMX1A-201ENST00000294816 Q8IYB0 196 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 SMRP1Q8NCR6 262 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 ZNF596Q8TC21 504 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 ARL2-SNX15V9GYD0 113 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 NCKAP5O14513 1909 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 TRGV10A0A0A0MS01 117 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 CDKN1BP46527 198 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 TNXAQ16473 311 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 MDP1Q86V88 176 aa8.52□□□□□ -1.05
LMX1A-201ENST00000294816 YLPM1P49750 1951 aaKnown RBP8.51□□□□□ -1.05
LMX1A-201ENST00000294816 H0Y8G0 127 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 HLA-DQA1P01909 254 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 IGFBP2P18065 325 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 CYB561P49447 251 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 CAMPP49913 170 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 OR1C1Q15619 314 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 LDLRAD2Q5SZI1 272 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 PRR27Q6MZM9 219 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 C19orf35Q6ZS72 473 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 OR2Y1Q8NGV0 311 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 NPVFQ9HCQ7 196 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 ENY2Q9NPA8 101 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 WASHC3Q9Y3C0 194 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 IGHV2OR16-5A0A0B4J2B6 119 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 C9JCJ5 164 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 GATA2P23769 480 aaPredicted RBP8.51□□□□□ -1.05
LMX1A-201ENST00000294816 MFAP2P55001 183 aa8.51□□□□□ -1.05
LMX1A-201ENST00000294816 TEPPQ6URK8 271 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms