RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 TMEM14BQ9NUH8 114 aa11.45□□□□□ -0.58
NXF1-201ENST00000294172 TNCP24821 2201 aa11.45□□□□□ -0.58
NXF1-201ENST00000294172 SRRM4A7MD48 611 aaKnown RBP11.44□□□□□ -0.58
NXF1-201ENST00000294172 B9A039 149 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 IFNA1P01562 189 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 AGAP20933 346 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 MDKP21741 143 aaPredicted RBP11.44□□□□□ -0.58
NXF1-201ENST00000294172 CHRNB4P30926 498 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 DLK1P80370 383 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 MRPL20Q9BYC9 149 aaKnown RBP11.44□□□□□ -0.58
NXF1-201ENST00000294172 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
NXF1-201ENST00000294172 VAX2Q9UIW0 290 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 FOXA2Q9Y261 457 aaPredicted RBP11.44□□□□□ -0.58
NXF1-201ENST00000294172 WDR83OSQ9Y284 106 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 OR51B2Q9Y5P1 312 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 ZNF727A8MUV8 499 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 LYNX1G3V0Z9 82 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 TNFRSF13BO14836 293 aaPredicted RBP11.44□□□□□ -0.58
NXF1-201ENST00000294172 LYNX1P0DP58 116 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 GCSAMLQ5JQS6 135 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 OR10A7Q8NGE5 316 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 OR10X1Q8NGY0 326 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 RAB24Q969Q5 203 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 TVP23CQ96ET8 276 aa11.44□□□□□ -0.58
NXF1-201ENST00000294172 C5orf52A6NGY3 159 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 MEOX2P50222 304 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 EFNB3Q15768 340 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 RBMS3Q6XE24 437 aaKnown RBP11.43□□□□□ -0.58
NXF1-201ENST00000294172 ZNF833PQ6ZTB9 187 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 CA5BP1Q8WTZ4 195 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 LOXP28300 417 aaPredicted RBP11.43□□□□□ -0.58
NXF1-201ENST00000294172 CDSNQ15517 529 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 FAM90A2PQ658T7 463 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 TREML4Q6UXN2 200 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 MUC15Q8N387 334 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 ST6GALNAC3Q8NDV1 305 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
NXF1-201ENST00000294172 J3QR06 171 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 CYB5BO43169 146 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 NPY1RP25929 384 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 ACOT6Q3I5F7 207 aaPredicted RBP11.42□□□□□ -0.58
NXF1-201ENST00000294172 Q8N7P7 452 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 GATAD1Q8WUU5 269 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 PRNDQ9UKY0 176 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 UPK2O00526 184 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 SIAH2O43255 324 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 CA2P00918 260 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 APOA2P02652 100 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 DIAPH2-AS1Q14236 149 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 POU2AF1Q16633 256 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 GGACTQ9BVM4 153 aa11.42□□□□□ -0.58
NXF1-201ENST00000294172 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
NXF1-201ENST00000294172 CDC34P49427 236 aaPredicted RBP11.41□□□□□ -0.58
NXF1-201ENST00000294172 PSMB3P49720 205 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 SLC35E3Q7Z769 313 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 HARBI1Q96MB7 349 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 P2RX4Q99571 388 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 PLEKHA3Q9HB20 300 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 PATZ1Q9HBE1 687 aaKnown RBP11.41□□□□□ -0.58
NXF1-201ENST00000294172 KAAG1Q9UBP8 84 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 TACC2O95359 2948 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 H0YJW9 148 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 UBE2CO00762 179 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 CD81P60033 236 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 ADORA2A-AS1P86434 159 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
NXF1-201ENST00000294172 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 FBXL19-AS1Q494R0 122 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 MGST2Q99735 147 aa11.41□□□□□ -0.58
NXF1-201ENST00000294172 DCHS2Q6V1P9 2916 aa11.4□□□□□ -0.58
NXF1-201ENST00000294172 MPDU1O75352 247 aa11.4□□□□□ -0.58
NXF1-201ENST00000294172 KBTBD11O94819 623 aa11.4□□□□□ -0.58
NXF1-201ENST00000294172 COL8A2P25067 703 aa11.4□□□□□ -0.58
NXF1-201ENST00000294172 ZNF674Q2M3X9 581 aa11.4□□□□□ -0.58
NXF1-201ENST00000294172 SSMEM1Q8WWF3 244 aa11.4□□□□□ -0.58
NXF1-201ENST00000294172 SPTBN1Q01082 2364 aaKnown RBP11.4□□□□□ -0.58
NXF1-201ENST00000294172 TEX50A0A1B0GTY4 177 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 A0A1W2PPV4 95 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 RPS10P46783 165 aaKnown RBP11.4□□□□□ -0.59
NXF1-201ENST00000294172 TMEM155Q4W5P6 130 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.59
NXF1-201ENST00000294172 MIC13Q5XKP0 118 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 FLYWCH2Q96CP2 140 aaKnown RBP11.4□□□□□ -0.59
NXF1-201ENST00000294172 MALSU1Q96EH3 234 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 YPEL4Q96NS1 127 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 NPVFQ9HCQ7 196 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 PXMP4Q9Y6I8 212 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 URGCP-MRPS24S4R325 110 aa11.4□□□□□ -0.59
NXF1-201ENST00000294172 MALRD1Q5VYJ5 2156 aa11.39□□□□□ -0.59
NXF1-201ENST00000294172 PAGE4O60829 102 aa11.39□□□□□ -0.59
NXF1-201ENST00000294172 IL6RP08887 468 aaPredicted RBP11.39□□□□□ -0.59
NXF1-201ENST00000294172 MAS1LP35410 378 aa11.39□□□□□ -0.59
NXF1-201ENST00000294172 OPRK1P41145 380 aa11.39□□□□□ -0.59
NXF1-201ENST00000294172 PRCDQ00LT1 54 aa11.39□□□□□ -0.59
NXF1-201ENST00000294172 PRB3Q04118 309 aaPredicted RBP11.39□□□□□ -0.59
NXF1-201ENST00000294172 ZNF672Q499Z4 452 aaPredicted RBP11.39□□□□□ -0.59
NXF1-201ENST00000294172 ZNF343Q6P1L6 599 aa11.39□□□□□ -0.59
NXF1-201ENST00000294172 OR5AN1Q8NGI8 311 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms