RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 MCRIP2Q9BUT9 160 aaKnown RBP6.4□□□□□ -1.38
EPHA4-201ENST00000281821 ELOA3CA0A087WX78 387 aaPredicted RBP6.4□□□□□ -1.38
EPHA4-201ENST00000281821 IGHV1-3A0A0C4DH29 117 aa6.4□□□□□ -1.38
EPHA4-201ENST00000281821 IAPPP10997 89 aa6.4□□□□□ -1.38
EPHA4-201ENST00000281821 C5orf64Q2M2E5 130 aa6.4□□□□□ -1.38
EPHA4-201ENST00000281821 C2CD4CQ8TF44 421 aa6.4□□□□□ -1.38
EPHA4-201ENST00000281821 DYRK2Q92630 601 aa6.4□□□□□ -1.38
EPHA4-201ENST00000281821 METTL26Q96S19 204 aa6.4□□□□□ -1.38
EPHA4-201ENST00000281821 TMEM89A2RUT3 159 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 TNFRSF9Q07011 255 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 TMEM187Q14656 261 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 TMEM217Q8N7C4 229 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 CCDC168Q8NDH2 2452 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 TIMM23O14925 209 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 PF4P02776 101 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 S100A8P05109 93 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 ANKRD55Q3KP44 614 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 TMEM255AQ5JRV8 349 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 ZNF818PQ6ZRF7 136 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 SMIM15Q7Z3B0 74 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 LDLRAD3Q86YD5 345 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 SELENOHQ8IZQ5 122 aaKnown RBP6.4□□□□□ -1.39
EPHA4-201ENST00000281821 GATAD1Q8WUU5 269 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 SLC25A32Q9H2D1 315 aa6.4□□□□□ -1.39
EPHA4-201ENST00000281821 ZFYVE26Q68DK2 2539 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 G6PCP35575 357 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 FOXL1Q12952 345 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 SRSF12Q8WXF0 261 aaKnown RBP6.39□□□□□ -1.39
EPHA4-201ENST00000281821 FOXA2Q9Y261 457 aaPredicted RBP6.39□□□□□ -1.39
EPHA4-201ENST00000281821 VSIG4Q9Y279 399 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 UFC1Q9Y3C8 167 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 TIMM9Q9Y5J7 89 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 A0A1W2PPE3 182 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 OVOL3O00110 214 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 FRZBQ92765 325 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 TXN2Q99757 166 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 FLVCR2Q9UPI3 526 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 WIPF3A6NGB9 483 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 HYPMO75409 117 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 FGF7P21781 194 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 PRSS8Q16651 343 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 UBAC2Q8NBM4 344 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 NECAP1Q8NC96 275 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 MAGT1Q9H0U3 335 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 PUS1Q9Y606 427 aaKnown RBP eCLIP6.39□□□□□ -1.39
EPHA4-201ENST00000281821 NDUFA6P56556 154 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 LOXL3P58215 753 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 RPL11P62913 178 aaKnown RBP6.39□□□□□ -1.39
EPHA4-201ENST00000281821 RAB32Q13637 225 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 TEX38Q6PEX7 206 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 C5orf66Q9H5L9 145 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 C15orf61A6NNL5 157 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 ZNF785A8K8V0 405 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 ELANEP08246 267 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 PRCDQ00LT1 54 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 POU2AF1Q16633 256 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 RPEL1Q2QD12 228 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 C11orf71Q6IPW1 123 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 PQLC2Q6ZP29 291 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 NABP2Q9BQ15 211 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 MALRD1Q5VYJ5 2156 aa6.39□□□□□ -1.39
EPHA4-201ENST00000281821 CACNA1DQ01668 2161 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 DNASE2O00115 360 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-201ENST00000281821 CD5LO43866 347 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 S1PR2O95136 353 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 HKR1P10072 659 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 PAX1P15863 534 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 SAA4P35542 130 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 UBE2G1P62253 170 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 PVRIGQ6DKI7 326 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 ZNF562Q6V9R5 426 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 OR1P1Q8NH06 330 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 SAT2Q96F10 170 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-201ENST00000281821 GFI1Q99684 422 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 MRPL32Q9BYC8 188 aaKnown RBP6.38□□□□□ -1.39
EPHA4-201ENST00000281821 TIMM8BQ9Y5J9 83 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-201ENST00000281821 DEDDO75618 318 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 TRGV3P03979 118 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 SEC11BP0C7V7 166 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 HIST1H1EP10412 219 aaKnown RBP6.38□□□□□ -1.39
EPHA4-201ENST00000281821 TEX261Q6UWH6 196 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 BTNL8Q6UX41 500 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 C11orf53Q8IXP5 236 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 OR4P4Q8NGL7 312 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 C21orf62Q9NYP8 219 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 A0A087X0M5 115 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 A0A1B0GX30 115 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 FAM223BA6NKX1 122 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 CCSO14618 274 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 CD8AP01732 235 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 DYNLT3P51808 116 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 FAM223AQ8IWN6 122 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 OR8I2Q8N0Y5 310 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 OR5AN1Q8NGI8 311 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 EAF1Q96JC9 268 aaPredicted RBP6.38□□□□□ -1.39
EPHA4-201ENST00000281821 SMDT1Q9H4I9 107 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 LINC00574Q9H8X3 128 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 TRAV41A0A0B4J266 112 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 H3BUX3 64 aa6.38□□□□□ -1.39
EPHA4-201ENST00000281821 HERPUD1Q15011 391 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms