RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 LURAP1Q96LR2 239 aa10.42□□□□□ -0.74
UBXN4-201ENST00000272638 KCNIP2Q9NS61 270 aa10.42□□□□□ -0.74
UBXN4-201ENST00000272638 NOTCH2Q04721 2471 aa10.42□□□□□ -0.74
UBXN4-201ENST00000272638 DBX2Q6ZNG2 339 aa10.42□□□□□ -0.74
UBXN4-201ENST00000272638 JPT1Q9UK76 154 aa10.42□□□□□ -0.74
UBXN4-201ENST00000272638 IGKV3-15P01624 115 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 RBP4P02753 201 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 HOXB1P14653 301 aaPredicted RBP10.41□□□□□ -0.74
UBXN4-201ENST00000272638 OR10W1Q8NGF6 305 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 OR1B1Q8NGR6 318 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 ASCL3Q9NQ33 180 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 SLC25A15Q9Y619 301 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 FAM90A26D6RGX4 464 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 SLC17A3O00476 420 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 IGKV1D-33P01593 117 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 IGKV1-33P01594 117 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 HSPE1P61604 102 aaKnown RBP10.41□□□□□ -0.74
UBXN4-201ENST00000272638 KIAA1644Q3SXP7 199 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 POM121Q96HA1 1249 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 PLSCR4Q9NRQ2 329 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 S4R3C0 116 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 GRIFINA4D1Z8 144 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 SRRM5B3KS81 715 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 IFNL4K9M1U5 179 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 PAX6P26367 422 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 GNG4P50150 75 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 ELOBQ15370 118 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 STPG3Q8N7X2 389 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 NEUROG1Q92886 237 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 ZNF714Q96N38 554 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 LPAR2Q9HBW0 351 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 MANBALQ9NQG1 85 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 HILPDAQ9Y5L2 63 aa10.41□□□□□ -0.74
UBXN4-201ENST00000272638 LINC00587B1AMM8 73 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 J3QW42 95 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 FCN1O00602 326 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 C1QTNF9P0C862 333 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 CAMPP49913 170 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 RANP62826 216 aaKnown RBP10.4□□□□□ -0.74
UBXN4-201ENST00000272638 OR10G8Q8NGN5 311 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 RPEQ96AT9 228 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 PSMG3Q9BT73 122 aaPredicted RBP10.4□□□□□ -0.74
UBXN4-201ENST00000272638 IDI2-AS1Q9NZ38 188 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 HSPB7Q9UBY9 170 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 NAT8BQ9UHF3 227 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 SCO2A0A1W2PP80 73 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 LY6HO94772 140 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 CGAP01215 116 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 IGHV1-46P01743 117 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 CD24P25063 80 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 CRYBB3P26998 211 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 IER3P46695 156 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 UBE2G1P62253 170 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 CA5BP1Q8WTZ4 195 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 SCNM1Q9BWG6 230 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 SIRT7Q9NRC8 400 aa10.4□□□□□ -0.74
UBXN4-201ENST00000272638 SEC14L6B5MCN3 397 aa10.4□□□□□ -0.75
UBXN4-201ENST00000272638 TNFSF13O75888 250 aa10.4□□□□□ -0.75
UBXN4-201ENST00000272638 CD3EP07766 207 aa10.4□□□□□ -0.75
UBXN4-201ENST00000272638 PMCHP20382 165 aa10.4□□□□□ -0.75
UBXN4-201ENST00000272638 TAS2R45P59539 299 aa10.4□□□□□ -0.75
UBXN4-201ENST00000272638 ZNF726P1Q15940 193 aa10.4□□□□□ -0.75
UBXN4-201ENST00000272638 ZNF705AQ6ZN79 300 aaPredicted RBP10.4□□□□□ -0.75
UBXN4-201ENST00000272638 DAZAP1Q96EP5 407 aaKnown RBP10.4□□□□□ -0.75
UBXN4-201ENST00000272638 SMDT1Q9H4I9 107 aa10.4□□□□□ -0.75
UBXN4-201ENST00000272638 TUBG2Q9NRH3 451 aa10.4□□□□□ -0.75
UBXN4-201ENST00000272638 NCBP2LA6PVI3 153 aaKnown RBP10.39□□□□□ -0.75
UBXN4-201ENST00000272638 KBTBD11O94819 623 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 SUB1P53999 127 aaKnown RBP eCLIP10.39□□□□□ -0.75
UBXN4-201ENST00000272638 ERVK11-1P61568 191 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 OR4X1Q8NH49 305 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 MRPL20Q9BYC9 149 aaKnown RBP10.39□□□□□ -0.75
UBXN4-201ENST00000272638 SDF2L1Q9HCN8 221 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 MBNL3Q9NUK0 354 aaKnown RBP10.39□□□□□ -0.75
UBXN4-201ENST00000272638 KBTBD11-OT1A0A1B0GTJ5 212 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 CCL21O00585 134 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 OR5I1Q13606 314 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 GAMTQ14353 236 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 CT45A1Q5HYN5 189 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 DPPA3Q6W0C5 159 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 DOLPP1Q86YN1 238 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 CT45A3Q8NHU0 189 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 IMMP2LQ96T52 175 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 NCKAP5O14513 1909 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 IGHG3P01860 377 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 SMIM6P0DI80 62 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 IL3RAP26951 378 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 LGALS4P56470 323 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 KRTAP27-1Q3LI81 207 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 VMA21Q3ZAQ7 101 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 Q6ZSR3 168 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 CORO2AQ92828 525 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 CTDSP1Q9GZU7 261 aa10.39□□□□□ -0.75
UBXN4-201ENST00000272638 MMP23AO75900 390 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 MOSP00540 346 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 ZNF134P52741 427 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 KRTDAPP60985 99 aa10.38□□□□□ -0.75
UBXN4-201ENST00000272638 RPL23P62829 140 aaKnown RBP10.38□□□□□ -0.75
UBXN4-201ENST00000272638 Q6ZS49 121 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms