RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 LRRK2Q5S007 2527 aa15.32■□□□□ 0.04
TRIM47-201ENST00000254816 WNK2Q9Y3S1 2297 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 CHD6Q8TD26 2715 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 CEBPZOSA8MTT3 80 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 IFNA17P01571 189 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 APOA2P02652 100 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 CRYBA1P05813 215 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 PDLIM4P50479 330 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 HAGHQ16775 308 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 AKR1C8PQ5T2L2 129 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 DTD1Q8TEA8 209 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 RSG1Q9BU20 258 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 SMCO4Q9NRQ5 59 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 IGHV3-72A0A0B4J1Y9 119 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 COLCA2A8K830 154 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 BUB1B-PAK6H3BSN5 160 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 HRASP01112 189 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 MYOD1P15172 320 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 IL3RAP26951 378 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 LMO4P61968 165 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 RPS16P62249 146 aaKnown RBP15.31■□□□□ 0.04
TRIM47-201ENST00000254816 FAM71F2Q6NXP2 309 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 HAPLN4Q86UW8 402 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 ZFP82Q8N141 532 aa15.31■□□□□ 0.04
TRIM47-201ENST00000254816 C7orf77A4D0Y5 90 aa15.3■□□□□ 0.04
TRIM47-201ENST00000254816 TAS2R30P59541 319 aa15.3■□□□□ 0.04
TRIM47-201ENST00000254816 OR4P4Q8NGL7 312 aa15.3■□□□□ 0.04
TRIM47-201ENST00000254816 SFT2D1Q8WV19 159 aa15.3■□□□□ 0.04
TRIM47-201ENST00000254816 TNFRSF14Q92956 283 aa15.3■□□□□ 0.04
TRIM47-201ENST00000254816 RBFOX3A6NFN3 312 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 FAM90A9PA6NNJ1 464 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 DFFBO76075 338 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 IFNA5P01569 189 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 CEBPGP53567 150 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 ATP5J2P56134 94 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 C2CD4CQ8TF44 421 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 ISOC2Q96AB3 205 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 CSMD2Q7Z408 3487 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 BEND2Q8NDZ0 799 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 PERPQ96FX8 193 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 HARBI1Q96MB7 349 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 OR4C12Q96R67 309 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 SPG11Q96JI7 2443 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 TNCP24821 2201 aa15.29■□□□□ 0.04
TRIM47-201ENST00000254816 A0A1W2PRD5 423 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 A0A1W2PRF3 423 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 A0A1W2PRM7 423 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 M0R1W7 72 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 ARG1P05089 322 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 SAA1P0DJI8 122 aaPredicted RBP15.28■□□□□ 0.04
TRIM47-201ENST00000254816 POU2AF1Q16633 256 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 LDLRAD2Q5SZI1 272 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 FAM168AQ92567 244 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 LHX4Q969G2 390 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 RITA1Q96K30 269 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 SVEP1Q4LDE5 3571 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 C15orf61A6NNL5 157 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 FBP1P09467 338 aa15.28■□□□□ 0.04
TRIM47-201ENST00000254816 FLYWCH2Q96CP2 140 aaKnown RBP15.28■□□□□ 0.04
TRIM47-201ENST00000254816 PUS1Q9Y606 427 aaKnown RBP eCLIP15.28■□□□□ 0.04
TRIM47-201ENST00000254816 A0A1B0GW64 132 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 ENSAO43768 121 aaKnown RBP15.27■□□□□ 0.04
TRIM47-201ENST00000254816 AARDQ4LEZ3 155 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 OR8G2PQ6IF36 304 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 HCP5Q6MZN7 132 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 VMO1Q7Z5L0 202 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 LILRB2Q8N423 598 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 VSIRQ9H7M9 311 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 LPAR2Q9HBW0 351 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 WASHC3Q9Y3C0 194 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 FBN2P35556 2912 aa15.27■□□□□ 0.04
TRIM47-201ENST00000254816 OPN1MWP04001 364 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 OPN1MW2P0DN77 364 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 OPN1MW3P0DN78 364 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 PAX6P26367 422 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 RAB13P51153 203 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 SPCS3P61009 180 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 PAX2Q02962 417 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 TMEM177Q53S58 311 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 SOHLH1Q5JUK2 328 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 TMEM14EPQ6UXP3 125 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 PDPNQ86YL7 162 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 OSR1Q8TAX0 266 aaPredicted RBP15.27■□□□□ 0.03
TRIM47-201ENST00000254816 KIAA1456Q9P272 454 aa15.27■□□□□ 0.03
TRIM47-201ENST00000254816 IL6RP08887 468 aaPredicted RBP15.26■□□□□ 0.03
TRIM47-201ENST00000254816 PRTN3P24158 256 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 HNF4GQ14541 408 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 MOB3BQ86TA1 216 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 OR4C13Q8NGP0 309 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 SCGB1C1Q8TD33 95 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 PIMREGQ9BSJ6 248 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 PCGF1Q9BSM1 259 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 TCF19Q9Y242 345 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 CELSR2Q9HCU4 2923 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 ABCA2Q9BZC7 2435 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 IGHV1-3A0A0C4DH29 117 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 UPK2O00526 184 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 ICAM4Q14773 271 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 ZNF429Q86V71 674 aa15.26■□□□□ 0.03
TRIM47-201ENST00000254816 C15orf54Q8N8G6 183 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms