RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 TLE4Q04727 773 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 TFF3Q07654 80 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 USF2Q15853 346 aaPredicted RBP12.07□□□□□ -0.48
MBD4-201ENST00000249910 PYY3Q5JQD4 70 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 LINC00312Q9Y6C7 94 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 CFAP46Q8IYW2 2715 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 C15orf62A8K5M9 175 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 LY6HO94772 140 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 CT45A6P0DMU7 189 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 CT45A5P0DMU8 189 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 CT45A7P0DMV0 189 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
MBD4-201ENST00000249910 CHRNB4P30926 498 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 DIAPH2-AS1Q14236 149 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 UNQ6494/PRO21346Q6UXR6 183 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 SLC35B3Q9H1N7 401 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 SIRT7Q9NRC8 400 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 SRRM4A7MD48 611 aaKnown RBP12.06□□□□□ -0.48
MBD4-201ENST00000249910 RRHO14718 337 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 SNRNP70P08621 437 aaKnown RBP12.06□□□□□ -0.48
MBD4-201ENST00000249910 SP5Q6BEB4 398 aaPredicted RBP12.06□□□□□ -0.48
MBD4-201ENST00000249910 OR4A47Q6IF82 309 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 SLC25A48Q6ZT89 311 aaKnown RBP12.06□□□□□ -0.48
MBD4-201ENST00000249910 MUC15Q8N387 334 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 RPP25LQ8N5L8 163 aaKnown RBP12.06□□□□□ -0.48
MBD4-201ENST00000249910 ST6GALNAC3Q8NDV1 305 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 LFNGQ8NES3 379 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 OR4S2Q8NH73 311 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 CORO2AQ92828 525 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 RCC1LQ96I51 464 aaKnown RBP12.06□□□□□ -0.48
MBD4-201ENST00000249910 ZNF714Q96N38 554 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 HEYLQ9NQ87 328 aaPredicted RBP12.06□□□□□ -0.48
MBD4-201ENST00000249910 GNG13Q9P2W3 67 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 ACACBO00763 2458 aa12.06□□□□□ -0.48
MBD4-201ENST00000249910 IGHV1-69-2A0A0G2JMI3 117 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 ZFP92A6NM28 416 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 COLCA2A8K830 154 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 M0R036 132 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 CIB3Q96Q77 187 aaPredicted RBP12.05□□□□□ -0.48
MBD4-201ENST00000249910 HINT2Q9BX68 163 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 LINC00574Q9H8X3 128 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 KIAA1456Q9P272 454 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 KPTNQ9Y664 436 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 ABCA1O95477 2261 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 TSTD3H0UI37 97 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 RBFOX2O43251 390 aaKnown RBP eCLIP12.05□□□□□ -0.48
MBD4-201ENST00000249910 NDUFB3O43676 98 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 AGAP20933 346 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 COL8A2P25067 703 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 ACSM6Q6P461 480 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 RPS10P5Q9NQ39 176 aa12.05□□□□□ -0.48
MBD4-201ENST00000249910 PUS1Q9Y606 427 aaKnown RBP eCLIP12.05□□□□□ -0.48
MBD4-201ENST00000249910 ZFHX3Q15911 3703 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 FGF7P21781 194 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 AWAT1Q58HT5 328 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 SSX8Q7RTT4 187 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 RAB9BQ9NP90 201 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 CACNA1AO00555 2505 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 ITGB1BP1O14713 200 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 TNFRSF13BO14836 293 aaPredicted RBP12.04□□□□□ -0.48
MBD4-201ENST00000249910 PAX1P15863 534 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 LRRC10Q5BKY1 277 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 SOHLH1Q5JUK2 328 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 DNLZQ5SXM8 178 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 HEPN1Q6WQI6 88 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 CYB561D1Q8N8Q1 229 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 TMEM170AQ8WVE7 144 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 ISOC2Q96AB3 205 aa12.04□□□□□ -0.48
MBD4-201ENST00000249910 PSMG3Q9BT73 122 aaPredicted RBP12.04□□□□□ -0.48
MBD4-201ENST00000249910 SMCO3A2RU48 225 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 B9A039 149 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 SERF2P84101 59 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 ICAM4Q14773 271 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 SLC24A4Q8NFF2 622 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 RAB24Q969Q5 203 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 PINX1Q96BK5 328 aaKnown RBP12.03□□□□□ -0.48
MBD4-201ENST00000249910 TMEM147Q9BVK8 224 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 GAL3ST2Q9H3Q3 398 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 TCF19Q9Y242 345 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 AP4M1O00189 453 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 LOXP28300 417 aaPredicted RBP12.03□□□□□ -0.48
MBD4-201ENST00000249910 THBS3P49746 956 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 GAGE1Q13065 139 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 ZNF787Q6DD87 383 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 CLCC1Q96S66 551 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 SLC25A22Q9H936 323 aa12.03□□□□□ -0.48
MBD4-201ENST00000249910 C7orf77A4D0Y5 90 aa12.02□□□□□ -0.48
MBD4-201ENST00000249910 SCAF4O95104 1147 aaKnown RBP12.02□□□□□ -0.48
MBD4-201ENST00000249910 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.48
MBD4-201ENST00000249910 GCSAMLQ5JQS6 135 aa12.02□□□□□ -0.48
MBD4-201ENST00000249910 OR13D1Q8NGV5 346 aa12.02□□□□□ -0.48
MBD4-201ENST00000249910 MRPL20Q9BYC9 149 aaKnown RBP12.02□□□□□ -0.48
MBD4-201ENST00000249910 SLC35D1Q9NTN3 355 aa12.02□□□□□ -0.48
MBD4-201ENST00000249910 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.49
MBD4-201ENST00000249910 DLEU1O43261 78 aa12.02□□□□□ -0.49
MBD4-201ENST00000249910 VDAC2P45880 294 aaPredicted RBP12.02□□□□□ -0.49
MBD4-201ENST00000249910 MEF2CQ06413 473 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms