RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TPRP12270 2363 aaKnown RBP17.7■□□□□ 0.42
CLN6-201ENST00000249806 FAM90A27PA6NNH2 459 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 DVL1O14640 695 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 CYB5BO43169 146 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 POU2AF1Q16633 256 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 OR51B2Q9Y5P1 312 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 URGCP-MRPS24S4R325 110 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 A0A087WWC5 75 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 AGAP20933 346 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 APOBEC3AP31941 199 aaPredicted RBP17.7■□□□□ 0.42
CLN6-201ENST00000249806 REG1BP48304 166 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 RTL8BQ17RB0 113 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 ACOT6Q3I5F7 207 aaPredicted RBP17.7■□□□□ 0.42
CLN6-201ENST00000249806 LRRC10Q5BKY1 277 aa17.7■□□□□ 0.42
CLN6-201ENST00000249806 MRPL20Q9BYC9 149 aaKnown RBP17.7■□□□□ 0.42
CLN6-201ENST00000249806 ABCA4P78363 2273 aa17.69■□□□□ 0.42
CLN6-201ENST00000249806 AKR1D1P51857 326 aa17.69■□□□□ 0.42
CLN6-201ENST00000249806 ZNF833PQ6ZTB9 187 aa17.69■□□□□ 0.42
CLN6-201ENST00000249806 SLC24A4Q8NFF2 622 aa17.69■□□□□ 0.42
CLN6-201ENST00000249806 OR10A7Q8NGE5 316 aa17.69■□□□□ 0.42
CLN6-201ENST00000249806 C1orf159Q96HA4 380 aa17.69■□□□□ 0.42
CLN6-201ENST00000249806 MGST2Q99735 147 aa17.69■□□□□ 0.42
CLN6-201ENST00000249806 GGACTQ9BVM4 153 aa17.69■□□□□ 0.42
CLN6-201ENST00000249806 PATZ1Q9HBE1 687 aaKnown RBP17.69■□□□□ 0.42
CLN6-201ENST00000249806 CA2P00918 260 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 CD3EP07766 207 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 IL6RP08887 468 aaPredicted RBP17.68■□□□□ 0.42
CLN6-201ENST00000249806 RPL35P42766 123 aaKnown RBP17.68■□□□□ 0.42
CLN6-201ENST00000249806 CDC34P49427 236 aaPredicted RBP17.68■□□□□ 0.42
CLN6-201ENST00000249806 PSMB3P49720 205 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 WDR25Q64LD2 544 aaPredicted RBP17.68■□□□□ 0.42
CLN6-201ENST00000249806 YIF1AO95070 293 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 NPY1RP25929 384 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 MAS1LP35410 378 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 SNRPEP62304 92 aaKnown RBP17.68■□□□□ 0.42
CLN6-201ENST00000249806 DIAPH2-AS1Q14236 149 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 ARSJQ5FYB0 599 aaPredicted RBP17.68■□□□□ 0.42
CLN6-201ENST00000249806 SDF2L1Q9HCN8 221 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 ENY2Q9NPA8 101 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 DCHS2Q6V1P9 2916 aa17.68■□□□□ 0.42
CLN6-201ENST00000249806 ANKHD1Q8IWZ3 2542 aaKnown RBP17.67■□□□□ 0.42
CLN6-201ENST00000249806 J3QR06 171 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 UPK2O00526 184 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 ELOBQ15370 118 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 MIC13Q5XKP0 118 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 KLF2Q9Y5W3 355 aaPredicted RBP17.67■□□□□ 0.42
CLN6-201ENST00000249806 IGHV1-69-2A0A0G2JMI3 117 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 MPDU1O75352 247 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 LOXP28300 417 aaPredicted RBP17.67■□□□□ 0.42
CLN6-201ENST00000249806 CA7P43166 264 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 CASP6P55212 293 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 ZNF674Q2M3X9 581 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 Q8WTZ3 238 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 GGTLC1Q9BX51 225 aa17.67■□□□□ 0.42
CLN6-201ENST00000249806 LYNX1G3V0Z9 82 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 CCL21O00585 134 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 PAGE4O60829 102 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 SAA1P0DJI8 122 aaPredicted RBP17.66■□□□□ 0.42
CLN6-201ENST00000249806 LYNX1P0DP58 116 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 NPVFQ9HCQ7 196 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 PRNDQ9UKY0 176 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 CXCL1P09341 107 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 OPRK1P41145 380 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 OR4F5Q8NH21 305 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 SSMEM1Q8WWF3 244 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 RPUSD4Q96CM3 377 aaKnown RBP17.66■□□□□ 0.42
CLN6-201ENST00000249806 OR4F4Q96R69 305 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 PXMP4Q9Y6I8 212 aa17.66■□□□□ 0.42
CLN6-201ENST00000249806 TACC2O95359 2948 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 SEC14L6B5MCN3 397 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 B9A039 149 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 SIAH2O43255 324 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 KBTBD11O94819 623 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 PNRC1Q12796 327 aaPredicted RBP17.65■□□□□ 0.42
CLN6-201ENST00000249806 CDSNQ15517 529 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 EFNB3Q15768 340 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 OR10X1Q8NGY0 326 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 SMIM7Q9BQ49 75 aa17.65■□□□□ 0.42
CLN6-201ENST00000249806 LSM4Q9Y4Z0 139 aaKnown RBP17.65■□□□□ 0.42
CLN6-201ENST00000249806 TEX50A0A1B0GTY4 177 aa17.64■□□□□ 0.42
CLN6-201ENST00000249806 A0A1W2PPV4 95 aa17.64■□□□□ 0.42
CLN6-201ENST00000249806 B4DEV8 164 aa17.64■□□□□ 0.42
CLN6-201ENST00000249806 H0YJW9 148 aa17.64■□□□□ 0.42
CLN6-201ENST00000249806 LINC00518Q8N0U6 118 aa17.64■□□□□ 0.42
CLN6-201ENST00000249806 MALSU1Q96EH3 234 aa17.64■□□□□ 0.42
CLN6-201ENST00000249806 MANBALQ9NQG1 85 aa17.64■□□□□ 0.42
CLN6-201ENST00000249806 UCNP55089 124 aa17.64■□□□□ 0.41
CLN6-201ENST00000249806 PRCDQ00LT1 54 aa17.64■□□□□ 0.41
CLN6-201ENST00000249806 PLEKHA3Q9HB20 300 aa17.64■□□□□ 0.41
CLN6-201ENST00000249806 SIRT7Q9NRC8 400 aa17.64■□□□□ 0.41
CLN6-201ENST00000249806 KAAG1Q9UBP8 84 aa17.64■□□□□ 0.41
CLN6-201ENST00000249806 ZNF257Q9Y2Q1 563 aa17.64■□□□□ 0.41
CLN6-201ENST00000249806 TGIF2-C20orf24A0A0A6YYL0 155 aa17.63■□□□□ 0.41
CLN6-201ENST00000249806 COL8A2P25067 703 aa17.63■□□□□ 0.41
CLN6-201ENST00000249806 RPS10P46783 165 aaKnown RBP17.63■□□□□ 0.41
CLN6-201ENST00000249806 OR5AN1Q8NGI8 311 aa17.63■□□□□ 0.41
CLN6-201ENST00000249806 HARBI1Q96MB7 349 aa17.63■□□□□ 0.41
CLN6-201ENST00000249806 COL6A6A6NMZ7 2263 aa17.63■□□□□ 0.41
CLN6-201ENST00000249806 DLX6P56179 175 aa17.63■□□□□ 0.41
CLN6-201ENST00000249806 OR10W1Q8NGF6 305 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms