RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TEX50A0A1B0GTY4 177 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 A0A1W2PN81 502 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 C15orf62A8K5M9 175 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 CHRNA7P36544 502 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 RAB5CP51148 216 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 RAB11AP62491 216 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 SLC38A11Q08AI6 406 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 LDLRAD2Q5SZI1 272 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 HAPLN4Q86UW8 402 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 MMD2Q8IY49 270 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 OR1L8Q8NGR8 309 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 NRGNQ92686 78 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 MALSU1Q96EH3 234 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 PSMG3-AS1Q96PY0 264 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 GGACTQ9BVM4 153 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 PLEKHA3Q9HB20 300 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 CHD6Q8TD26 2715 aa11.43□□□□□ -0.58
SDF2-201ENST00000247020 TIMM23O14925 209 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 VENTXO95231 258 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 CRYGBP07316 175 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 FAM157CP0CG43 387 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 S100A1P23297 94 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 GATA3P23771 443 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 COL8A1P27658 744 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 PRB3Q04118 309 aaPredicted RBP11.42□□□□□ -0.58
SDF2-201ENST00000247020 ARL16Q0P5N6 197 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 DEFB113Q30KQ7 82 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 FAM74A1Q5RGS3 127 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 THNSL2Q86YJ6 484 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 MBD6Q96DN6 1003 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 NDUFA4L2Q9NRX3 87 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 PFDN2Q9UHV9 154 aa11.42□□□□□ -0.58
SDF2-201ENST00000247020 IGHV3-72A0A0B4J1Y9 119 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 B4DSR2 109 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 IFNA10P01566 189 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 ATP6V0CP27449 155 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 F2RL1P55085 397 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 BLOC1S1P78537 153 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 EBI3Q14213 229 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 VWC2Q2TAL6 325 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 SPINK9Q5DT21 86 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 LHFPL4Q7Z7J7 247 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 MRPL41Q8IXM3 137 aaKnown RBP11.41□□□□□ -0.58
SDF2-201ENST00000247020 HSD17B11Q8NBQ5 300 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 SLC24A4Q8NFF2 622 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 TMEM147Q9BVK8 224 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 NUDT19A8MXV4 375 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 UMAD1C9J7I0 102 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 TRIM77I1YAP6 450 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 SLC25A17O43808 307 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 FBXO24O75426 580 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 MOSP00540 346 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 MSMBP08118 114 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 PSG5Q15238 335 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 LRRC75BQ2VPJ9 315 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 BSXQ3C1V8 233 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 OR8G2PQ6IF36 304 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 SLC25A24Q6NUK1 477 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 PRSS57Q6UWY2 283 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 OR2T10Q8NGZ9 312 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 SCGB1C1Q8TD33 95 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 PSMG3Q9BT73 122 aaPredicted RBP11.41□□□□□ -0.58
SDF2-201ENST00000247020 ZNF430Q9H8G1 570 aaPredicted RBP11.41□□□□□ -0.58
SDF2-201ENST00000247020 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 HILPDAQ9Y5L2 63 aa11.41□□□□□ -0.58
SDF2-201ENST00000247020 ABCA2Q9BZC7 2435 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 A0A096LNT2 108 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 TRAV20A0A0B4J274 112 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 FNDC10F2Z333 226 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 NDUFA3O95167 84 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 NPY1RP25929 384 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 LOXL1Q08397 574 aaPredicted RBP11.4□□□□□ -0.58
SDF2-201ENST00000247020 PRSS8Q16651 343 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 C2orf83Q53S99 150 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 PPP1R27Q86WC6 154 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 NPBQ8NG41 125 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 WDR61Q9GZS3 305 aaKnown RBP11.4□□□□□ -0.58
SDF2-201ENST00000247020 UQCC1Q9NVA1 299 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 TIMM9Q9Y5J7 89 aa11.4□□□□□ -0.58
SDF2-201ENST00000247020 PRSS46E5RG02 174 aa11.39□□□□□ -0.59
SDF2-201ENST00000247020 RRHO14718 337 aa11.39□□□□□ -0.59
SDF2-201ENST00000247020 KRTAP10-9P60411 292 aa11.39□□□□□ -0.59
SDF2-201ENST00000247020 DLK1P80370 383 aa11.39□□□□□ -0.59
SDF2-201ENST00000247020 ERHP84090 104 aaKnown RBP11.39□□□□□ -0.59
SDF2-201ENST00000247020 MRGPRG-AS1Q2M3A8 158 aa11.39□□□□□ -0.59
SDF2-201ENST00000247020 ETV3LQ6ZN32 361 aa11.39□□□□□ -0.59
SDF2-201ENST00000247020 PCNPQ8WW12 178 aaKnown RBP11.39□□□□□ -0.59
SDF2-201ENST00000247020 RITA1Q96K30 269 aa11.39□□□□□ -0.59
SDF2-201ENST00000247020 PARP11Q9NR21 331 aa11.39□□□□□ -0.59
SDF2-201ENST00000247020 METTL1Q9UBP6 276 aaKnown RBP11.39□□□□□ -0.59
SDF2-201ENST00000247020 CENPVL3A0A0U1RRI6 287 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 ZNF705EA8MWA4 302 aaPredicted RBP11.38□□□□□ -0.59
SDF2-201ENST00000247020 NPFFO15130 113 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 NBR2O15453 112 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 SOX15O60248 233 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 MPDU1O75352 247 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 IGKV1D-33P01593 117 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 IGKV1-33P01594 117 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 BRS3P32247 399 aa11.38□□□□□ -0.59
SDF2-201ENST00000247020 SERF2P84101 59 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms