RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 IGSF23A1L1A6 192 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 LEUTXA8MZ59 168 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 C22orf46C9J442 243 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 BUB1B-PAK6H3BSN5 160 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 TRIM77I1YAP6 450 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 TSPAN9O75954 239 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 NMBP08949 121 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 FAM157CP0CG43 387 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 BLOC1S1P78537 153 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 RELBQ01201 579 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 OR4A47Q6IF82 309 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 SPATA3Q8NHX4 192 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 MRPL20Q9BYC9 149 aaKnown RBP10.69□□□□□ -0.7
SLIRP-201ENST00000238688 MAGT1Q9H0U3 335 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 HIPK2Q9H2X6 1198 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 RBKSQ9H477 322 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 ONECUT1Q9UBC0 465 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 PFDN2Q9UHV9 154 aa10.69□□□□□ -0.7
SLIRP-201ENST00000238688 IGHV2-70DA0A0C4DH43 119 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 A0A1W2PPE3 182 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 ODF3BA8MYP8 253 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 SHOXO15266 292 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 FGF16O43320 207 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 TMEM50AO95807 157 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 IFNA5P01569 189 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 ARG1P05089 322 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 SPP1P10451 314 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 HTR1DP28221 377 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 MAS1LP35410 378 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 HSPE1P61604 102 aaKnown RBP10.68□□□□□ -0.7
SLIRP-201ENST00000238688 VMA21Q3ZAQ7 101 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 RPL7L1Q6DKI1 246 aaKnown RBP10.68□□□□□ -0.7
SLIRP-201ENST00000238688 DPPA3Q6W0C5 159 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 EIF4E3Q8N5X7 224 aaKnown RBP10.68□□□□□ -0.7
SLIRP-201ENST00000238688 OR5C1Q8NGR4 320 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 RPEQ96AT9 228 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 HARBI1Q96MB7 349 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 DPM3Q9P2X0 92 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 CDC42EP3Q9UKI2 254 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 NUP50Q9UKX7 468 aa10.68□□□□□ -0.7
SLIRP-201ENST00000238688 TBL2Q9Y4P3 447 aaKnown RBP10.68□□□□□ -0.7
SLIRP-201ENST00000238688 FAM24AA6NFZ4 105 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 CEBPZOSA8MTT3 80 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 FNDC10F2Z333 226 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 H7C2Y5 167 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 UPK2O00526 184 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 KBTBD11O94819 623 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 IFNA17P01571 189 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 IGHV3-7P01780 117 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 SULT1A2P50226 295 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 LMO4P61968 165 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 PAX2Q02962 417 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 HABP2Q14520 560 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-201ENST00000238688 C1orf229Q6ZS94 237 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-201ENST00000238688 TEX45Q8NA69 505 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 OR4P4Q8NGL7 312 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 TMEM167AQ8TBQ9 72 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 C1orf159Q96HA4 380 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 FAM210AQ96ND0 272 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 PSMG3Q9BT73 122 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-201ENST00000238688 MS4A7Q9GZW8 240 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-201ENST00000238688 LPAR2Q9HBW0 351 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 ENY2Q9NPA8 101 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 INSIG2Q9Y5U4 225 aa10.67□□□□□ -0.7
SLIRP-201ENST00000238688 OR9G9P0C7N8 305 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 CD1BP29016 333 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 RAB11AP62491 216 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 PRCDQ00LT1 54 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 NHLH2Q02577 135 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 IL17RELQ6ZVW7 336 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 HSD17B13Q7Z5P4 300 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-201ENST00000238688 COMMD1Q8N668 190 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 Q8N7P7 452 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 OR10P1Q8NGE3 313 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 CLDND2Q8NHS1 167 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 TCF19Q9Y242 345 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 TIMM9Q9Y5J7 89 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 TNCP24821 2201 aa10.66□□□□□ -0.7
SLIRP-201ENST00000238688 TET2Q6N021 2002 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-201ENST00000238688 IGHV1-3A0A0C4DH29 117 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 A0A1W2PN81 502 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 MPDU1O75352 247 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 IGKV1-16P04430 117 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 GATA3P23771 443 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 CHRNA7P36544 502 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 COMPP49747 757 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-201ENST00000238688 RPL8P62917 257 aaKnown RBP10.65□□□□□ -0.7
SLIRP-201ENST00000238688 SERF2P84101 59 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 IZUMO4Q1ZYL8 232 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 SPANXN5Q5MJ07 72 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 FAM120AOSQ5T036 256 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 UTF1Q5T230 341 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 LILRB2Q8N423 598 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 OR1L8Q8NGR8 309 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 TMED6Q8WW62 240 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 SRSF8Q9BRL6 282 aaKnown RBP10.65□□□□□ -0.7
SLIRP-201ENST00000238688 TMEM147Q9BVK8 224 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
SLIRP-201ENST00000238688 PARP11Q9NR21 331 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms