RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 KIR2DS2P43631 304 aa13.92□□□□□ -0.18
CHGA-201ENST00000216492 NCR3LG1Q68D85 454 aa13.92□□□□□ -0.18
CHGA-201ENST00000216492 QTRT1Q9BXR0 403 aaKnown RBP13.92□□□□□ -0.18
CHGA-201ENST00000216492 SLC25A22Q9H936 323 aa13.92□□□□□ -0.18
CHGA-201ENST00000216492 NAT8Q9UHE5 227 aa13.92□□□□□ -0.18
CHGA-201ENST00000216492 TGIF2-C20orf24A0A0A6YYL0 155 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 TMEM250H0YL14 139 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 RBFOX2O43251 390 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHGA-201ENST00000216492 SOX15O60248 233 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 RND2P52198 227 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 AARDQ4LEZ3 155 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 PRAMEF5Q5TYX0 476 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 OR4A16Q8NH70 328 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 CALYQ9NYX4 217 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 M0R1X1 148 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 F2RL2O00254 374 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 NDUFB3O43676 98 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 RNF224P0DH78 156 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 SPCS3P61009 180 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 HNF4GQ14541 408 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 ACOT6Q3I5F7 207 aaPredicted RBP13.91□□□□□ -0.18
CHGA-201ENST00000216492 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 NANPQ8TBE9 248 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 NEU4Q8WWR8 484 aaPredicted RBP13.91□□□□□ -0.18
CHGA-201ENST00000216492 SMIM7Q9BQ49 75 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 TMPRSS5Q9H3S3 457 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 UBTD1Q9HAC8 227 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 KAAG1Q9UBP8 84 aa13.91□□□□□ -0.18
CHGA-201ENST00000216492 SPTAN1Q13813 2472 aaKnown RBP13.9□□□□□ -0.18
CHGA-201ENST00000216492 TRAV20A0A0B4J274 112 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 KBTBD11-OT1A0A1B0GTJ5 212 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 OPN1MWP04001 364 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 OPN1MW2P0DN77 364 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 OPN1MW3P0DN78 364 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 RAB7AP51149 207 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 LINC00205P59089 165 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 CD81P60033 236 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 C17orf58Q2M2W7 97 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 LRRC10Q5BKY1 277 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 WDR25Q64LD2 544 aaPredicted RBP13.9□□□□□ -0.18
CHGA-201ENST00000216492 CYP2G1PQ6ZSU1 146 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 OR52E5Q8NH55 327 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 FAM210BQ96KR6 192 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 ZNF462Q96JM2 2506 aa13.9□□□□□ -0.18
CHGA-201ENST00000216492 LRBAP50851 2863 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 hADV38S2A0JD32 116 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 C15orf62A8K5M9 175 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 LY6HO94772 140 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 KBTBD11O94819 623 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 SLC16A13Q7RTY0 426 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 CORO2AQ92828 525 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 S1PR3Q99500 378 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 GSN-AS1Q9NRJ2 163 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 DVL1O14640 695 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 CLN5O75503 358 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 FCN3O75636 299 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 FSTL3O95633 263 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 MDKP21741 143 aaPredicted RBP13.89□□□□□ -0.19
CHGA-201ENST00000216492 LOXL3P58215 753 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 RPL31P62899 125 aaKnown RBP13.89□□□□□ -0.19
CHGA-201ENST00000216492 TMEM241Q24JQ0 296 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 CTSZQ9UBR2 303 aa13.89□□□□□ -0.19
CHGA-201ENST00000216492 ITGB1BP1O14713 200 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 HMGB3O15347 200 aaKnown RBP13.88□□□□□ -0.19
CHGA-201ENST00000216492 MPDU1O75352 247 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 HOXA5P20719 270 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 CD1BP29016 333 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 SSTP61278 116 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 RPS16P62249 146 aaKnown RBP13.88□□□□□ -0.19
CHGA-201ENST00000216492 TCF23Q7RTU1 214 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 RAB24Q969Q5 203 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 GAB2Q9UQC2 676 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 COL12A1Q99715 3063 aa13.88□□□□□ -0.19
CHGA-201ENST00000216492 IFNA10P01566 189 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 S100PP25815 95 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 CDC34P49427 236 aaPredicted RBP13.87□□□□□ -0.19
CHGA-201ENST00000216492 NDUFA6P56556 154 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 MRPS11P82912 194 aaKnown RBP13.87□□□□□ -0.19
CHGA-201ENST00000216492 MEF2CQ06413 473 aaPredicted RBP13.87□□□□□ -0.19
CHGA-201ENST00000216492 ADIRFQ15847 76 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 OR4S2Q8NH73 311 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 GGACTQ9BVM4 153 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 IFI27L2Q9H2X8 130 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 OR51M1Q9H341 326 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 WDR83OSQ9Y284 106 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 LINC00312Q9Y6C7 94 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 USF3Q68DE3 2245 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 ZNF729A6NN14 1252 aaPredicted RBP13.87□□□□□ -0.19
CHGA-201ENST00000216492 PROP1O75360 226 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 CDX1P47902 265 aaPredicted RBP13.87□□□□□ -0.19
CHGA-201ENST00000216492 PDLIM3Q53GG5 364 aaPredicted RBP13.87□□□□□ -0.19
CHGA-201ENST00000216492 RPL39P5Q59GN2 51 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 SSX9Q7RTT3 188 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 OR4F5Q8NH21 305 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 H1FXQ92522 213 aaKnown RBP13.87□□□□□ -0.19
CHGA-201ENST00000216492 OR4F4Q96R69 305 aa13.87□□□□□ -0.19
CHGA-201ENST00000216492 SMCO3A2RU48 225 aa13.86□□□□□ -0.19
CHGA-201ENST00000216492 IGHV3-7P01780 117 aa13.86□□□□□ -0.19
CHGA-201ENST00000216492 IGHV2-70P01814 119 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms