RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ighv9-2A0A0B4J1J4 117 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 AponG3X9D6 251 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Cpeb1P70166 561 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Znf770Q8BIQ8 705 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ctag2Q9D9S4 219 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Nit2Q9JHW2 276 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Olfr1029A2ATE0 324 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Vmn1r168K7N6B6 309 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ewsr1Q61545 655 aaKnown RBP16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Clec2fQ8VI21 196 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Rdh19G5E8H9 318 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Acvr1P37172 509 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ndufb6Q3UIU2 128 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Fam174bQ8K064 153 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Olfr1079Q8VF52 315 aa16.43■□□□□ 0.22
Trim71-201ENSMUST00000111816 Utf1Q6J1H4 339 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Timp4Q9JHB3 224 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Pgam5Q8BX10 288 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm20773A0A0A6YXW2 232 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm6993A0A1W2P738 69 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ube2dnl1A2AFH1 155 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Skint9A7TZG3 319 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm20795J3QP49 232 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm21310J3QQ23 232 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Wsb2O54929 404 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm21440Q3TTD8 232 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Slc17a2Q5SZA1 478 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Scgb2b24Q7M747 112 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Sh2d5Q8JZW5 429 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Emc6Q9CQW0 110 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Igkv18-36A0A075B5M9 114 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ighv1-78A0A0G2JGN3 117 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ankrd65F6YK91 380 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm10130F6ZHM5 101 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Q3V0E1 1183 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Rtl6Q505G4 243 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Npy4rQ61041 375 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Fgf20Q9ESL9 211 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Psme4Q5SSW2 1843 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Tmem45bQ8VCZ2 278 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm12887B1AVM1 119 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ren2P00796 401 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 RhodP97348 210 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Znf775Q8BI73 538 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Zfp119bQ8K0G9 543 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Greb1Q3UHK3 1954 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm6890A2BG94 208 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm12886B1AZM5 119 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Olfr1038Q8VGS1 319 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Fer1l4A3KGK3 1992 aa16.42■□□□□ 0.22
Trim71-201ENSMUST00000111816 Dusp1P28563 367 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gng3P63216 75 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Olfr107Q7TRK4 309 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Mon2Q80TL7 1715 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Pcbp4P57724 403 aaKnown RBP16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 MybphlQ5FW53 355 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 1700008P02RikQ9DAJ8 175 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 VtnP29788 478 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Foxr2Q3UM89 302 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Havcr1Q5QNS5 305 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 GpnmbQ99P91 574 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 TsaccQ9DA44 124 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Vmn1r47Q9EQ51 310 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Sipa1l2Q80TE4 1722 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ifna2P01573 190 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 H1fooQ8VIK3 304 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Necap2Q9D1J1 266 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Rnf186Q9D241 226 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Socs1O35716 212 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ube3dQ8BX13 368 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Iglon5Q8HW98 336 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Bcdin3dQ91YP1 285 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Acp1Q9D358 158 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Slc25a22Q9D6M3 323 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ascl3Q9JJR7 174 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Mpdu1Q9R0Q9 247 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Cd40P27512 289 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Egfbp2P36368 261 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ep300B2RWS6 2412 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Sec16aA2AIX1 2377 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Spata6Q3U6K5 488 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 PrkraQ9WTX2 313 aaKnown RBP16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Megf6Q80V70 1572 aa16.41■□□□□ 0.22
Trim71-201ENSMUST00000111816 Il17dA0A0B4J1G4 205 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Olfr1331K7N684 317 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 OpalinQ7M750 143 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Hbq1aQ8BYM1 145 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 PtgesQ9JM51 153 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gm14214V9GX35 225 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Taf1Q80UV9 1891 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Itgb7P26011 806 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Olfr399Q7TRX3 311 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Ceacam11Q9D0Z8 303 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Prg4Q9JM99 1054 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Gpr34Q9R1K6 375 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 A0A286YD13 301 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Foxd2O35392 492 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 PtgfrP43117 366 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Olfr128Q7TRJ1 308 aa16.4■□□□□ 0.22
Trim71-201ENSMUST00000111816 Slc25a40Q8BGP6 337 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms