RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Elavl3Q60900 367 aaKnown RBP6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Dnd1Q6VY05 352 aa6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr714Q7TRN0 317 aa6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Mef2cQ8CFN5 474 aa6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Defb19Q8K3I8 83 aa6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 GmppaQ922H4 420 aa6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Cds2Q99L43 444 aa6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Btf3l4Q9CQH7 158 aaKnown RBP6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Ube2cQ9D1C1 179 aa6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Gm12117V9GXK0 151 aa6.6□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Ighv6-3A0A075B5T2 118 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr1274-psA0A1L1SQ02 309 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 4931429L15RikE9PVU2 379 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Gm8653K9J7G2 307 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Vmn1r117L7N2C9 307 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Itgb2P11835 771 aaKnown RBP6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Egr3P43300 387 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Tango2P54797 276 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Dynlt3P56387 116 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Mdga2P60755 949 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Prss44Q402U7 372 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Fam57bQ7TNV1 275 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Pygo2Q80V76 405 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 C030005K15RikQ8BQN9 115 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Cd200r5Q8BTP3 270 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Acp7Q8BX37 438 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Vmn1r70Q8R254 298 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Slc6a8Q8VBW1 640 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr52Q8VFL0 319 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Ube2v1Q9CZY3 147 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Tmem9bQ9JJR8 199 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Adh4Q9QYY9 377 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Trip12G5E870 2025 aaKnown RBP6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Lrrk1Q3UHC2 2014 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Ighv16-1A0A0A6YW39 117 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Gm5916G5E8W5 102 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Bbip1J3QMK2 67 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr741L7N1Y5 311 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Vmn1r86L7N213 316 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Il18P70380 192 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Trav3-3Q5R1C3 114 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr9Q60885 312 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 CstbQ62426 98 aaKnown RBP6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Ypel2Q65Z95 119 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Tas2r114Q7M722 309 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr1204Q7TR10 309 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Tbl1xr1Q8BHJ5 514 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Zfp52Q8BJ45 724 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Aph1aQ8BVF7 265 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Vmn1r225Q8R2A5 298 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr1394Q8VET2 312 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr446Q8VEV0 308 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr186Q8VEX5 309 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Yipf2Q99LP8 312 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Aig1Q9D8B1 262 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Klf5Q9Z0Z7 446 aaKnown RBP6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Supt4h1bQ9Z199 117 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Olfr196E9PYP4 309 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Vmn1r88E9Q235 316 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Gm21783J3QM57 227 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 P01808 119 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Csn2P10598 231 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Gabrg3P27681 467 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 RanP62827 216 aaKnown RBP6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Ctf2P83714 204 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Rplp2P99027 115 aaKnown RBP6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Lemd1Q14C37 129 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Fbxw13Q8BI57 466 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 AmtQ8CFA2 403 aaKnown RBP6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Pom121Q8K3Z9 1200 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Phospho1Q8R2H9 267 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Fam69bQ99ML4 431 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Map1lc3bQ9CQV6 125 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 Dazap2Q9DCP9 168 aa6.59□□□□□ -1.35
Bdnf-209ENSMUST00000111050 SncaO55042 140 aaKnown RBP6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Lefty2P57785 368 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Rdh1Q8CGV4 317 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 RetnlgQ8K426 117 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Mib2Q8R516 973 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Olfr347Q8VGK2 312 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Olfr57Q8VGU7 319 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Nkg7Q99PA5 165 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Cops7aQ9CZ04 275 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Scp2d1Q9DAH1 156 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Cd5lQ9QWK4 352 aa6.59□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Pappa2E9PZ87 1789 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Lama2Q60675 3118 aaKnown RBP6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Trav10nA0A075B622 114 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Trav10A0A075B642 114 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Ighv1-62-2A0A0A6YXZ4 119 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Mettl8A2AUU0 281 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Nat8f7E0CYR6 227 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 A630073D07RikE9PWS6 100 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Lef1P27782 397 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Lhx4P53776 390 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Ppp1caP62137 330 aaKnown RBP6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Olfr1340Q3KPC7 315 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Smim7Q5RKS2 75 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 Foxc2Q61850 494 aa6.58□□□□□ -1.36
Bdnf-209ENSMUST00000111050 EtdQ80SW5 59 aa6.58□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms