RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 P01638 115 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Fgf4P11403 202 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 PpiaP17742 164 aaKnown RBP8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Hist1h1aP43275 213 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Chrna7P49582 502 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 EnsaP60840 121 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Thbs3Q05895 956 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Samt2Q497M0 247 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Msl2Q69ZF8 577 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Zfp948Q6DFU8 667 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Atpaf1Q811I0 324 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 YbeyQ8CAV0 164 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Acer2Q8VD53 275 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr916Q8VG53 310 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Abhd14aQ922Q6 247 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 MpiQ924M7 423 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Ranbp2Q9ERU9 3053 aaKnown RBP8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Abca7Q91V24 2159 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Cdhr4H3BJZ2 783 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 P10404 641 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Tbrg1Q3UB74 406 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Sys1Q78S06 156 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Cstl1Q80Y72 140 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Tubg2Q8VCK3 451 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr960Q8VET5 316 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr720Q8VF37 316 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Ear10Q923L6 156 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Mrpl42Q9CPV3 142 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Sft2d3Q9CSV6 209 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Zfp111Q9R164 701 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Eif2s3xQ9Z0N1 472 aaKnown RBP8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Vamp5Q9Z2P8 102 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Ighv5-15A0A0A6YWC7 117 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Gm42543A0A0G2JET4 117 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr1326-ps1A0A140T8J7 311 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr1097A2AVA9 315 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr555E9Q547 315 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Vmn1r167G3UW71 315 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 CideaO70302 217 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Igh-VJ558P01758 117 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 MpzP27573 248 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Mcpt8P43430 247 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Npy4rQ61041 375 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 H2-M10.6Q85ZW5 330 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Rab39bQ8BHC1 213 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Lrrc20Q8CI70 184 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr469Q8VF66 314 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr483Q8VG05 315 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Ndufb8Q9D6J5 186 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Dusp3Q9D7X3 185 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Rev3lQ61493 3122 aa8.41□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 A0A286YCQ8 80 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 A630023A22RikJ3QP60 199 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 H2-LP01897 362 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Hist1h1bP43276 223 aaKnown RBP8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 St8sia5P70126 412 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Dhrs2Q149L0 282 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 2210407C18RikQ6YI28 220 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr275Q7TS18 319 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr136Q8VG72 312 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Tmprss11dQ8VHK8 417 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Npas3Q9QZQ0 925 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Nckap5E9QAE1 1909 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Zfp407G3UVV3 2246 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Ighv6-4A0A0A6YX19 119 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Mettl8A2AUU0 281 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Olfr102B2RT33 308 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Fcer1gP20491 86 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Bmp8aP34821 399 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Vmn1r181Q0P547 304 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Foxl1Q64731 336 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Zfp85Q7TMC9 473 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Acsm5Q8BGA8 578 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Zfp3Q8BLB0 497 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Rfpl4aQ8VH31 287 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Stard4Q99JV5 224 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 9330161L09RikQ9D253 136 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Sdf2l1Q9ESP1 221 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Med13Q5SWW4 2171 aa8.4□□□□□ -1.06
Pcdh1-201ENSMUST00000057185 Abca4O35600 2310 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr418A0A140T8J6 310 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ntsr1O88319 424 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 RelP15307 587 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Slc39a7Q31125 476 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 H2-T22Q31615 379 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gfod1Q3UHD2 390 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 SspnQ62147 216 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr138Q7TRI7 312 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr132Q7TRI8 313 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 RflnaQ7TS73 204 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm10600Q8BQ57 223 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Q8BTC1 67 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Vmn1r225Q8R2A5 298 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Slc29a3Q99P65 475 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cisd2Q9CQB5 135 aaKnown RBP8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gpr34Q9R1K6 375 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 TectaO08523 2155 aa8.4□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm6880A3KG45 208 aa8.39□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm17677B3GLJ5 116 aa8.39□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Wisp3D3Z5L9 354 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms