RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Cd5lQ9QWK4 352 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Fbln5Q9WVH9 448 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm5890A0A140LI04 305 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr895L7N210 316 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Ninj1O70131 152 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 B3gat2P59270 324 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Tmprss12Q3V0Q7 336 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Usf2Q64705 346 aaKnown RBP8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr782Q7TRI2 314 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Zdhhc25Q810M4 279 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Q8CDS7 251 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Mr1Q8HWB0 341 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gltpd2Q8K0R6 321 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr1392Q8VFA6 311 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Osr2Q91ZD1 312 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Q9DAL9 119 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 TprF6ZDS4 2431 aaKnown RBP8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rpl23a-ps3A0A140T8M7 156 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm36864A0A1Y7VJE6 447 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 MiipA2A7Y5 387 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 H2-M10.1O19443 331 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Pitx3O35160 302 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Igh-3P01867 404 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 GrnP28798 589 aaKnown RBP8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 AvpP35455 168 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Fgf8P37237 268 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rpl23aP62751 156 aaKnown RBP8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Ear1P97426 155 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Clec12bQ149M0 275 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Map6Q7TSJ2 906 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Dirc2Q8BFQ6 478 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 FrkQ922K9 512 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Tmem208Q9CR96 173 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Dtwd2Q9D0U1 298 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 RprmQ9JJ72 109 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 NmuQ9QXK8 174 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Ighv5-12A0A075B5Q4 117 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Cd79aP11911 220 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 SowahbQ8BZW2 760 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 FuomQ8R2K1 153 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr1412Q8VET3 321 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr113Q8VEU4 312 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr181Q8VGQ7 317 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Ear10Q923L6 156 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Cdc42ep3Q9CQC5 254 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rhebl1Q9D8T3 184 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Prok2Q9QXU7 128 aa8.4□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Vmn1r180B9EK86 305 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Ankrd65F6YK91 380 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 G530012D18RikJ3QK25 139 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr117L7N1Z1 317 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 GzmaP11032 260 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Foxa2P35583 459 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Il11P47873 199 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rab2aP53994 212 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Dhrs2Q149L0 282 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Ceacam10Q61400 265 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 RalyQ64012 312 aaKnown RBP8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vash2Q8C5G2 355 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr130Q8VFC1 317 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr114Q923Q8 312 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Lmo1Q924W9 156 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Bcl2l14Q9CPT0 328 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr710Q9EP55 310 aa8.4□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Celsr1O35161 3034 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm5678A0A1B0GRG8 277 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1220F7BL62 311 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 RorcP51450 516 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rab11aP62492 216 aaKnown RBP8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rab1AP62821 205 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 PkibQ04758 92 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Cdv3Q4VAA2 281 aaKnown RBP8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Taar8bQ5QD06 344 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Mtch1Q791T5 389 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Cdk3Q80YP0 303 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm5447Q8BPB2 115 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Lrrc25Q8K1T1 297 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Dok5Q91ZM9 306 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Sf3b5Q923D4 86 aaKnown RBP8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Abhd12Q99LR1 398 aaKnown RBP8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Phf7Q9DAG9 307 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hils1Q9QYL0 170 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Ighv1-67A0A0G2JFN9 117 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Kcnk15B2RVL1 343 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tex54G3UW99 86 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hbb-yP02104 147 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Arf1P84078 181 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Cd200r1lQ6XJV6 249 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr136Q8VG72 312 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr980Q8VH08 310 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tspan2Q922J6 221 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Stard4Q99JV5 224 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 D730048I06RikQ9CQB8 106 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Mrpl41Q9CQN7 135 aaKnown RBP8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Zmat5Q9CQR5 170 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Q9CRC3 126 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Zfp111Q9R164 701 aa8.39□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Trbv29A0A0G2LB96 114 aa8.38□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 A0A1Y7VIT9 351 aa8.38□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 1700031F05RikB1AX30 191 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms