RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Arl6ip5Q8R5J9 188 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cisd1Q91WS0 108 aaKnown RBP7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Mrpl42Q9CPV3 142 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Lamp5Q9D387 280 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ap1s2Q9DB50 160 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Rab25Q9WTL2 213 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cldn20G5E8X0 219 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr92L7N475 312 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Prrt1O35449 306 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 P01660 111 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 PrkacaP05132 351 aaKnown RBP7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Fgf2P15655 154 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Icam2P35330 277 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gabrr1P56475 480 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Snrpd2P62317 118 aaKnown RBP7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm12253Q5NC48 229 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm12258Q5NC63 627 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Taar8bQ5QD06 344 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Repin1Q5U4E2 545 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Q80VP5 184 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cd200r5Q8BTP3 270 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Slc17a9Q8VCL5 447 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Pdcd10Q8VE70 212 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1350Q8VF34 308 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 CsprsQ99388 208 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 TsnaxQ9QZE7 290 aaKnown RBP7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ighv6-5A0A0A6YWS9 119 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr175-ps1A0A140T8K4 308 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 1700003H04RikE9PXM2 192 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm21721J3QMK7 227 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm5849J3QPE5 117 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Vmn1r80L7N1Z3 308 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ccr6O54689 367 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ifna7P06799 190 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Foxa3P35584 353 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Fabp2P55050 132 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 SelenopP70274 380 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Loxl1P97873 607 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Yes1Q04736 541 aaKnown RBP7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm5127Q3UQH6 212 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ccdc190Q3URK1 288 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ceacam14Q78Y72 263 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1031Q7TR87 336 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Lurap1Q9D6I9 239 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Egr4Q9WUF2 478 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 CnmdQ9Z1F6 334 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Itpr3P70227 2670 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 6430628N08RikA0A0U1RQ45 177 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1490A0A1L1SVH0 321 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 1700031F05RikB1AX30 191 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Kcns2O35174 477 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Mtatp6P00848 226 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Mfsd4b3Q3UN21 355 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm21943Q5FWD5 227 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 EpopQ7TNS8 369 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Glrx5Q80Y14 152 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Nfam1Q8R4V1 264 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Tlcd2Q8VC26 310 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1446Q8VFX4 308 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1272Q8VGN8 308 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cysltr2Q920A1 309 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Wdr77Q99J09 342 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Elp5Q99L85 300 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Rnase6Q9D244 153 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 OcstampQ9D611 498 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gpx8Q9D7B7 209 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Vmn1r44Q9EQ47 310 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Nqo2Q9JI75 231 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 TslpQ9JIE6 140 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 SrpxQ9R0M3 464 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cldn15Q9Z0S5 227 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Abca12E9Q876 2595 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ighv5-15A0A0A6YWC7 117 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1496B9EHG2 317 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm5799E9Q2M1 201 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Vmn1r57K7N731 310 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 H3f3cP02301 136 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Hoxb5P09079 269 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 AhsgP29699 345 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Rgs16P97428 201 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Tex30Q3TUU5 225 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Slc38a11Q3USY0 453 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Lyg2Q3V1I0 213 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr924Q7TRB8 308 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Q8BR90 294 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 RhofQ8BYP3 211 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Mbnl2Q8C181 373 aaKnown RBP7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Tmem230Q8CIB6 120 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Tex36Q9D5N9 219 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr926Q9EQ98 308 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Irak1bp1Q9ESJ7 259 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Plp2Q9R1Q7 152 aa7.29□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cmya5Q70KF4 3739 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Pom121l12A0A1B0GSJ4 278 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1098A2AVB0 315 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr248E9Q1L6 309 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 4933408B17RikG3X9B4 273 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm6594J3QM43 95 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Casp6O08738 276 aa7.28□□□□□ -1.24
Trim39-201ENSMUST00000042717 Saa1P05366 122 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms