RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Mcts2Q9CQ21 181 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 ManfQ9CXI5 179 aaKnown RBP13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Gm36864A0A1Y7VJE6 447 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Rnf39A2RT81 352 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 A6H6Q4 206 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Esp38A8R0X1 80 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Scgb1b3J3QJY4 93 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 F2rl2O08675 369 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Fam57aQ5ND56 257 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Olfr1131Q7TR45 309 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Il22ra1Q80XZ4 581 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Olfr1242Q8VGM6 306 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Sfxn4Q925N1 313 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Atoh7Q9Z2E5 149 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 PappaQ8R4K8 1624 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Ctxnd1A0A1B0GST9 59 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Gm10358A0A1D5RLD8 333 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 GapdhP16858 333 aaKnown RBP13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Ier3P46694 153 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Dbx1P52950 335 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Ube2l3P68037 154 aaKnown RBP13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Cks1brtQ3UNC9 96 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 MENTQ569E4 350 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Tnfrsf8Q60846 498 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Mob3aQ8BSU7 217 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Olfr802Q8VGJ2 312 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Gm3839S4R1W1 333 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Cacna1bO55017 2327 aa13.4□□□□□ -0.26
Col2a1-201ENSMUST00000023123 Ankrd65F6YK91 380 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Vax1Q2NKI2 338 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Fblim1Q71FD7 375 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Olfr1454Q8VFW2 307 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Kcnmb2Q9CZM9 235 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Tbx21Q9JKD8 530 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Igkv10-94A0A075B5L1 115 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Dhrs2Q149L0 282 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Ptpn18Q61152 453 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Vmn1r50Q9EP51 310 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Trbv26A0A0B4J1P5 115 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Vmn1r128L7N2B4 307 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 PlauP06869 433 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Wdyhv1Q80WB5 209 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Aqp6Q8C4A0 293 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Adipor1Q91VH1 375 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Mbnl1Q9JKP5 341 aaKnown RBP13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Urb1Q571H0 2274 aaKnown RBP13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Spink14B9EJP9 96 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Vmn1r224E9PWK2 298 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Hoxb3P09026 433 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Dlx4P70436 240 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Fam160a2Q3U2I3 975 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 IslrQ6GU68 428 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Tmem212Q8C6V3 187 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 LiphQ8CIV3 451 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Abhd14aQ922Q6 247 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Glrx2Q923X4 156 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Hcfc1r1Q9CYQ5 120 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Mrpl30Q9D7N6 160 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Syt11Q9R0N3 430 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Ltbp2O08999 1813 aa13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Zdbf2Q5SS00 2493 aaKnown RBP13.39□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Ccl1P10146 92 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 NmsQ5H8A1 153 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Rpl24Q8BP67 157 aaKnown RBP13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Olfr922Q8VG50 311 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Olfr1038Q8VGS1 319 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Olfr101Q920Z0 308 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 DeddQ9Z1L3 318 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Tmem74bA2AU34 232 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Casp16-psI6L890 176 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Vmn1r194J3JS27 296 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Pitx3O35160 302 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Dll3O88516 592 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 P01795 144 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Cxcl2P10889 100 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Psg26Q4KL65 475 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 TifabQ8JZM6 147 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Olfr786Q8VFH8 312 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Eva1aQ91WM6 156 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Dok5Q91ZM9 306 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Q9CR34 168 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Gm4133K9J7G6 307 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Evx1P23683 416 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Rac3P60764 192 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Cd55bQ61476 407 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Il31Q6EAL8 163 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Vash2Q8C5G2 355 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Olfr916Q8VG53 310 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Chac2Q9CQG1 178 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Hspb9Q9DAM3 168 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Zfp334A2A4U6 679 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Tcf21O35437 179 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 P01808 119 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Upk2P38575 184 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Pcbp4P57724 403 aaKnown RBP13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 RhodP97348 210 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Ankrd34cQ8BLB8 534 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Vmn1r62Q8R2C0 300 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Pam16Q9CQV1 125 aa13.38□□□□□ -0.27
Col2a1-201ENSMUST00000023123 Ppp1r1aQ9ERT9 171 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms